RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 GABRA1P14867 456 aa17.17■□□□□ 0.34
PTCD3-210ENST00000473829 ADH7P40394 386 aa17.17■□□□□ 0.34
PTCD3-210ENST00000473829 DSCR4P56555 118 aaPredicted RBP17.17■□□□□ 0.34
PTCD3-210ENST00000473829 ACSF3Q4G176 576 aaPredicted RBP17.17■□□□□ 0.34
PTCD3-210ENST00000473829 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.17■□□□□ 0.34
PTCD3-210ENST00000473829 TMEM211Q6ICI0 200 aa17.17■□□□□ 0.34
PTCD3-210ENST00000473829 TNFAIP8L2Q6P589 184 aaPredicted RBP17.17■□□□□ 0.34
PTCD3-210ENST00000473829 CCDC71Q8IV32 467 aaPredicted RBP17.17■□□□□ 0.34
PTCD3-210ENST00000473829 MIER2Q8N344 545 aa17.17■□□□□ 0.34
PTCD3-210ENST00000473829 RND1Q92730 232 aa17.17■□□□□ 0.34
PTCD3-210ENST00000473829 NEURL3Q96EH8 262 aa17.17■□□□□ 0.34
PTCD3-210ENST00000473829 PANX1Q96RD7 426 aa17.17■□□□□ 0.34
PTCD3-210ENST00000473829 SDF2Q99470 211 aa17.17■□□□□ 0.34
PTCD3-210ENST00000473829 MRPS18CQ9Y3D5 142 aaKnown RBP17.17■□□□□ 0.34
PTCD3-210ENST00000473829 CRYBG3Q68DQ2 2970 aa17.17■□□□□ 0.34
PTCD3-210ENST00000473829 ADGRG4Q8IZF6 3080 aa17.16■□□□□ 0.34
PTCD3-210ENST00000473829 CCDC154A6NI56 674 aa17.16■□□□□ 0.34
PTCD3-210ENST00000473829 NPIPB9F8W1W9 429 aa17.16■□□□□ 0.34
PTCD3-210ENST00000473829 NDUFB5O43674 189 aa17.16■□□□□ 0.34
PTCD3-210ENST00000473829 EDF1O60869 148 aaKnown RBP17.16■□□□□ 0.34
PTCD3-210ENST00000473829 GSNP06396 782 aa17.16■□□□□ 0.34
PTCD3-210ENST00000473829 DCTP40126 519 aa17.16■□□□□ 0.34
PTCD3-210ENST00000473829 STARP49675 285 aa17.16■□□□□ 0.34
PTCD3-210ENST00000473829 C17orf67Q0P5P2 114 aa17.16■□□□□ 0.34
PTCD3-210ENST00000473829 FUT5Q11128 374 aa17.16■□□□□ 0.34
PTCD3-210ENST00000473829 TIGD2Q4W5G0 525 aa17.16■□□□□ 0.34
PTCD3-210ENST00000473829 ZNF787Q6DD87 383 aa17.16■□□□□ 0.34
PTCD3-210ENST00000473829 DNAJC14Q6Y2X3 702 aaPredicted RBP17.16■□□□□ 0.34
PTCD3-210ENST00000473829 CHDHQ8NE62 594 aaPredicted RBP17.16■□□□□ 0.34
PTCD3-210ENST00000473829 OR5M1Q8NGP8 315 aa17.16■□□□□ 0.34
PTCD3-210ENST00000473829 RAB8BQ92930 207 aa17.16■□□□□ 0.34
PTCD3-210ENST00000473829 C1GALT1C1Q96EU7 318 aa17.16■□□□□ 0.34
PTCD3-210ENST00000473829 SFXN2Q96NB2 322 aa17.16■□□□□ 0.34
PTCD3-210ENST00000473829 CCDC28BQ9BUN5 200 aa17.16■□□□□ 0.34
PTCD3-210ENST00000473829 A0A0G2JNJ9 132 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 CENPVL1A0A0U1RR11 272 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 A0A1W2PQD3 144 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 SCDO00767 359 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 OIP5O43482 229 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 TOXO94900 526 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 CLDN14O95500 239 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 IL6P05231 212 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 OR12D1P0DN82 309 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 HK1P19367 917 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 ATP6V1C1P21283 382 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 HTR1EP28566 365 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 CHI3L1P36222 383 aaPredicted RBP17.15■□□□□ 0.34
PTCD3-210ENST00000473829 MRPL19P49406 292 aaKnown RBP17.15■□□□□ 0.34
PTCD3-210ENST00000473829 LHX2P50458 406 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 POLR2JP52435 117 aaKnown RBP17.15■□□□□ 0.34
PTCD3-210ENST00000473829 GANABQ14697 944 aaKnown RBP17.15■□□□□ 0.34
PTCD3-210ENST00000473829 FLYWCH1Q4VC44 716 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 HEPHL1Q6MZM0 1159 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 ARSKQ6UWY0 536 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 PM20D2Q8IYS1 436 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 RFWD2Q8NHY2 731 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 VPS33AQ96AX1 596 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 NPAS1Q99742 590 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 COQ3Q9NZJ6 369 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 Q9UFV3 132 aa17.15■□□□□ 0.34
PTCD3-210ENST00000473829 KLF2Q9Y5W3 355 aaPredicted RBP17.15■□□□□ 0.34
PTCD3-210ENST00000473829 UNC79Q9P2D8 2635 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 FAM234BA2RU67 622 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 PRAMEF27A3QJZ7 478 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 DUXAA6NLW8 204 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 AHRRA9YTQ3 701 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 SHISA8B8ZZ34 492 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 C19orf84I3L1E1 186 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 FCMRO60667 390 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 SOX30O94993 753 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 CPN1P15169 458 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 HPGDP15428 266 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 CD1EP15812 388 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 CLDN18P56856 261 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 ZNF630Q2M218 657 aaPredicted RBP17.14■□□□□ 0.33
PTCD3-210ENST00000473829 ARHGAP11BQ3KRB8 267 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 GTDC1Q4AE62 458 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 KLHL26Q53HC5 615 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 RAET1LQ5VY80 246 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 ZNF621Q6ZSS3 439 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 RNF130Q86XS8 419 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 FUNDC1Q8IVP5 155 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 PNPT1Q8TCS8 783 aaKnown RBP17.14■□□□□ 0.33
PTCD3-210ENST00000473829 DTNBP1Q96EV8 351 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 SH3YL1Q96HL8 342 aaPredicted RBP17.14■□□□□ 0.33
PTCD3-210ENST00000473829 TUBA1CQ9BQE3 449 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 ZNF350Q9GZX5 532 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 PTGES2Q9H7Z7 377 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 NPHS2Q9NP85 383 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 KCNE5Q9UJ90 142 aa17.14■□□□□ 0.33
PTCD3-210ENST00000473829 OR2M5A3KFT3 312 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 FAM90A27PA6NNH2 459 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 RFXANKO14593 260 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 TNFRSF21O75509 655 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 EPPINO95925 133 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 HOXD4P09016 255 aaPredicted RBP17.13■□□□□ 0.33
PTCD3-210ENST00000473829 ZNF708P17019 499 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 CHMP24386 653 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 CHRNB4P30926 498 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 PTGER4P35408 488 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms