RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 A0A087WZY1 265 aa17.75■□□□□ 0.43
COL9A3-210ENST00000472880 ALG1L2C9J202 215 aa17.75■□□□□ 0.43
COL9A3-210ENST00000472880 SIAH2O43255 324 aa17.75■□□□□ 0.43
COL9A3-210ENST00000472880 ARHGEF9O43307 516 aa17.75■□□□□ 0.43
COL9A3-210ENST00000472880 SMPD2O60906 423 aa17.75■□□□□ 0.43
COL9A3-210ENST00000472880 AQP8O94778 261 aa17.75■□□□□ 0.43
COL9A3-210ENST00000472880 PLGP00747 810 aaPredicted RBP17.75■□□□□ 0.43
COL9A3-210ENST00000472880 NGFRP08138 427 aa17.75■□□□□ 0.43
COL9A3-210ENST00000472880 ADSLP30566 484 aaPredicted RBP17.75■□□□□ 0.43
COL9A3-210ENST00000472880 MAP3K8P41279 467 aa17.75■□□□□ 0.43
COL9A3-210ENST00000472880 PCLAFQ15004 111 aa17.75■□□□□ 0.43
COL9A3-210ENST00000472880 GUSBP1Q15486 140 aa17.75■□□□□ 0.43
COL9A3-210ENST00000472880 RNF165Q6ZSG1 346 aa17.75■□□□□ 0.43
COL9A3-210ENST00000472880 Q6ZSR9 355 aa17.75■□□□□ 0.43
COL9A3-210ENST00000472880 ZNF550Q7Z398 422 aa17.75■□□□□ 0.43
COL9A3-210ENST00000472880 CXorf67Q86X51 503 aaPredicted RBP17.75■□□□□ 0.43
COL9A3-210ENST00000472880 KRTAP1-3Q8IUG1 177 aa17.75■□□□□ 0.43
COL9A3-210ENST00000472880 P3H2Q8IVL5 708 aa17.75■□□□□ 0.43
COL9A3-210ENST00000472880 ZNF610Q8N9Z0 462 aa17.75■□□□□ 0.43
COL9A3-210ENST00000472880 GATSQ8NAP1 163 aa17.75■□□□□ 0.43
COL9A3-210ENST00000472880 PIGTQ969N2 578 aa17.75■□□□□ 0.43
COL9A3-210ENST00000472880 ZC3HAV1LQ96H79 300 aaKnown RBP17.75■□□□□ 0.43
COL9A3-210ENST00000472880 UBTD1Q9HAC8 227 aa17.75■□□□□ 0.43
COL9A3-210ENST00000472880 ACSS1Q9NUB1 689 aaPredicted RBP17.75■□□□□ 0.43
COL9A3-210ENST00000472880 TMED5Q9Y3A6 229 aa17.75■□□□□ 0.43
COL9A3-210ENST00000472880 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 ESPNB1AK53 854 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 SLU7O95391 586 aaKnown RBP17.74■□□□□ 0.43
COL9A3-210ENST00000472880 LINC00032P0C843 101 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 ACP2P11117 423 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 HPGDP15428 266 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 DDX5P17844 614 aaKnown RBP17.74■□□□□ 0.43
COL9A3-210ENST00000472880 FPR1P21462 350 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 TBXA2RP21731 343 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 FRKP42685 505 aaPredicted RBP17.74■□□□□ 0.43
COL9A3-210ENST00000472880 ASMTP46597 345 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 ZNF41P51814 821 aaPredicted RBP17.74■□□□□ 0.43
COL9A3-210ENST00000472880 VSNL1P62760 191 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 PDE7AQ13946 482 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.74■□□□□ 0.43
COL9A3-210ENST00000472880 EXOC3L2Q2M3D2 409 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 GALNTL6Q49A17 601 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 RFTN2Q52LD8 501 aaPredicted RBP17.74■□□□□ 0.43
COL9A3-210ENST00000472880 KANK2Q63ZY3 851 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 MFSD12Q6NUT3 480 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 FIGNL1Q6PIW4 674 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 WDR75Q8IWA0 830 aaKnown RBP17.74■□□□□ 0.43
COL9A3-210ENST00000472880 DDIASQ8IXT1 998 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 OR6Y1Q8NGX8 325 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 OR4C3Q8NH37 302 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 JADE3Q92613 823 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 GIMAP5Q96F15 307 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 PIP5K1AQ99755 562 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 GATA5Q9BWX5 397 aaPredicted RBP17.74■□□□□ 0.43
COL9A3-210ENST00000472880 KLHL4Q9C0H6 718 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 PAQR5Q9NXK6 330 aaPredicted RBP17.74■□□□□ 0.43
COL9A3-210ENST00000472880 NTMQ9P121 344 aa17.74■□□□□ 0.43
COL9A3-210ENST00000472880 MCTS1Q9ULC4 181 aaKnown RBP17.74■□□□□ 0.43
COL9A3-210ENST00000472880 LSM1O15116 133 aaKnown RBP17.73■□□□□ 0.43
COL9A3-210ENST00000472880 TRIM13O60858 407 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 KCNK2O95069 426 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 INHBBP09529 407 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 ALOX5P09917 674 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 CTBP2P56545 445 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 SLC18A2Q05940 514 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 DUSP5Q16690 384 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 Q5PR19 223 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 R3HCC1LQ7Z5L2 792 aaKnown RBP17.73■□□□□ 0.43
COL9A3-210ENST00000472880 MISPQ8IVT2 679 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 HOMEZQ8IX15 550 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 LRRC75A-AS1Q8N1F1 130 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 GTPBP8Q8N3Z3 284 aaPredicted RBP17.73■□□□□ 0.43
COL9A3-210ENST00000472880 COX18Q8N8Q8 333 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 SLC16A11Q8NCK7 471 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 OR6K3Q8NGY3 331 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 OR10D3Q8NH80 312 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 CAVIN3Q969G5 261 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 ZBTB8AQ96BR9 441 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 MTERF3Q96E29 417 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 GMPPAQ96IJ6 420 aaPredicted RBP17.73■□□□□ 0.43
COL9A3-210ENST00000472880 CCL19Q99731 98 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 TUBB1Q9H4B7 451 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 BAIAP2L1Q9UHR4 511 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 DNAJC15Q9Y5T4 150 aa17.73■□□□□ 0.43
COL9A3-210ENST00000472880 A0A1W2PRB8 838 aa17.72■□□□□ 0.43
COL9A3-210ENST00000472880 C7orf72A4D263 438 aa17.72■□□□□ 0.43
COL9A3-210ENST00000472880 SCDO00767 359 aa17.72■□□□□ 0.43
COL9A3-210ENST00000472880 SYNGR4O95473 234 aa17.72■□□□□ 0.43
COL9A3-210ENST00000472880 ME2P23368 584 aa17.72■□□□□ 0.43
COL9A3-210ENST00000472880 LCN1P31025 176 aa17.72■□□□□ 0.43
COL9A3-210ENST00000472880 HPCAL1P37235 193 aa17.72■□□□□ 0.43
COL9A3-210ENST00000472880 SLC6A8P48029 635 aa17.72■□□□□ 0.43
COL9A3-210ENST00000472880 SERPINB4P48594 390 aa17.72■□□□□ 0.43
COL9A3-210ENST00000472880 PRIM2P49643 509 aa17.72■□□□□ 0.43
COL9A3-210ENST00000472880 ACKR1Q16570 336 aa17.72■□□□□ 0.43
COL9A3-210ENST00000472880 PLPPR5Q32ZL2 321 aa17.72■□□□□ 0.43
COL9A3-210ENST00000472880 ZCCHC12Q6PEW1 402 aa17.72■□□□□ 0.43
COL9A3-210ENST00000472880 ZAR1Q86SH2 424 aa17.72■□□□□ 0.43
COL9A3-210ENST00000472880 FAM110BQ8TC76 370 aa17.72■□□□□ 0.43
COL9A3-210ENST00000472880 TWIST2Q8WVJ9 160 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms