RNA–Protein interactions for RNA: ENST00000472326.2

SGCE-210, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 453 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-210ENST00000472326 OR1A1Q9P1Q5 309 aa4.42□□□□□ -1.7
SGCE-210ENST00000472326 ANKMY1Q9P2S6 941 aa4.42□□□□□ -1.7
SGCE-210ENST00000472326 SPASTQ9UBP0 616 aa4.42□□□□□ -1.7
SGCE-210ENST00000472326 RNF222A6NCQ9 220 aa4.41□□□□□ -1.7
SGCE-210ENST00000472326 TUBAL3A6NHL2 446 aa4.41□□□□□ -1.7
SGCE-210ENST00000472326 C19orf81C9J6K1 198 aa4.41□□□□□ -1.7
SGCE-210ENST00000472326 CCER2I3L3R5 266 aa4.41□□□□□ -1.7
SGCE-210ENST00000472326 MMP23AO75900 390 aa4.41□□□□□ -1.7
SGCE-210ENST00000472326 TIMP1P01033 207 aa4.41□□□□□ -1.7
SGCE-210ENST00000472326 NR2C1P13056 603 aa4.41□□□□□ -1.7
SGCE-210ENST00000472326 RPL29P47914 159 aaKnown RBP4.41□□□□□ -1.7
SGCE-210ENST00000472326 MRPS11P82912 194 aaKnown RBP4.41□□□□□ -1.7
SGCE-210ENST00000472326 GABPB1Q06547 395 aaPredicted RBP4.41□□□□□ -1.7
SGCE-210ENST00000472326 WASHC5Q12768 1159 aa4.41□□□□□ -1.7
SGCE-210ENST00000472326 EXOSC2Q13868 293 aaKnown RBP4.41□□□□□ -1.7
SGCE-210ENST00000472326 CDKN3Q16667 212 aa4.41□□□□□ -1.7
SGCE-210ENST00000472326 ZNF658BQ4V348 819 aaPredicted RBP4.41□□□□□ -1.7
SGCE-210ENST00000472326 METTL11BQ5VVY1 283 aa4.41□□□□□ -1.7
SGCE-210ENST00000472326 ZNF589Q86UQ0 364 aaPredicted RBP4.41□□□□□ -1.7
SGCE-210ENST00000472326 RNF148Q8N7C7 305 aa4.41□□□□□ -1.7
SGCE-210ENST00000472326 MINDY2Q8NBR6 621 aa4.41□□□□□ -1.7
SGCE-210ENST00000472326 UPRTQ96BW1 309 aa4.41□□□□□ -1.7
SGCE-210ENST00000472326 COMMD4Q9H0A8 199 aa4.41□□□□□ -1.7
SGCE-210ENST00000472326 ATG10Q9H0Y0 220 aa4.41□□□□□ -1.7
SGCE-210ENST00000472326 GLIPR2Q9H4G4 154 aa4.41□□□□□ -1.7
SGCE-210ENST00000472326 GALPQ9UBC7 116 aa4.41□□□□□ -1.7
SGCE-210ENST00000472326 GMPPBQ9Y5P6 360 aa4.41□□□□□ -1.7
SGCE-210ENST00000472326 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.41□□□□□ -1.7
SGCE-210ENST00000472326 CCDC180Q9P1Z9 1646 aa4.41□□□□□ -1.7
SGCE-210ENST00000472326 CC2D2AQ9P2K1 1620 aa4.41□□□□□ -1.7
SGCE-210ENST00000472326 TRIM3O75382 744 aaPredicted RBP4.4□□□□□ -1.71
SGCE-210ENST00000472326 MT-ATP6P00846 226 aa4.4□□□□□ -1.71
SGCE-210ENST00000472326 GNPDA1P46926 289 aa4.4□□□□□ -1.71
SGCE-210ENST00000472326 EGFEM1PQ0D2K5 195 aa4.4□□□□□ -1.71
SGCE-210ENST00000472326 OR8G2PQ6IF36 304 aa4.4□□□□□ -1.71
SGCE-210ENST00000472326 NEK5Q6P3R8 708 aa4.4□□□□□ -1.71
SGCE-210ENST00000472326 TIFABQ6ZNK6 161 aa4.4□□□□□ -1.71
SGCE-210ENST00000472326 RNF175Q8N4F7 328 aa4.4□□□□□ -1.71
SGCE-210ENST00000472326 FGGYQ96C11 551 aa4.4□□□□□ -1.71
SGCE-210ENST00000472326 NMNAT2Q9BZQ4 307 aa4.4□□□□□ -1.71
SGCE-210ENST00000472326 POLR3FQ9H1D9 316 aaPredicted RBP4.4□□□□□ -1.71
SGCE-210ENST00000472326 SLC25A51Q9H1U9 297 aa4.4□□□□□ -1.71
SGCE-210ENST00000472326 FANCFQ9NPI8 374 aa4.4□□□□□ -1.71
SGCE-210ENST00000472326 SAMD4AQ9UPU9 718 aaKnown RBP4.4□□□□□ -1.71
SGCE-210ENST00000472326 EIF3LQ9Y262 564 aaKnown RBP4.4□□□□□ -1.71
SGCE-210ENST00000472326 USP16Q9Y5T5 823 aa4.4□□□□□ -1.71
SGCE-210ENST00000472326 SPAG9O60271 1321 aaKnown RBP4.4□□□□□ -1.71
SGCE-210ENST00000472326 ZNF17P17021 662 aa4.39□□□□□ -1.71
SGCE-210ENST00000472326 LRRC36Q1X8D7 754 aa4.39□□□□□ -1.71
SGCE-210ENST00000472326 SULT1C3Q6IMI6 304 aa4.39□□□□□ -1.71
SGCE-210ENST00000472326 EFCAB13Q8IY85 973 aa4.39□□□□□ -1.71
SGCE-210ENST00000472326 MKXQ8IYA7 352 aa4.39□□□□□ -1.71
SGCE-210ENST00000472326 ZBTB44Q8NCP5 570 aa4.39□□□□□ -1.71
SGCE-210ENST00000472326 OR56B1Q8NGI3 324 aa4.39□□□□□ -1.71
SGCE-210ENST00000472326 ANKRD49Q8WVL7 239 aa4.39□□□□□ -1.71
SGCE-210ENST00000472326 COG4Q9H9E3 785 aa4.39□□□□□ -1.71
SGCE-210ENST00000472326 ROPN1Q9HAT0 212 aaPredicted RBP4.39□□□□□ -1.71
SGCE-210ENST00000472326 YAE1D1Q9NRH1 226 aa4.39□□□□□ -1.71
SGCE-210ENST00000472326 PAK1IP1Q9NWT1 392 aaPredicted RBP4.39□□□□□ -1.71
SGCE-210ENST00000472326 ABCC4O15439 1325 aa4.39□□□□□ -1.71
SGCE-210ENST00000472326 LRRC30A6NM36 301 aa4.38□□□□□ -1.71
SGCE-210ENST00000472326 WASHC1A8K0Z3 465 aa4.38□□□□□ -1.71
SGCE-210ENST00000472326 ANXA3P12429 323 aa4.38□□□□□ -1.71
SGCE-210ENST00000472326 IGLL1P15814 213 aa4.38□□□□□ -1.71
SGCE-210ENST00000472326 ZNF32P17041 273 aa4.38□□□□□ -1.71
SGCE-210ENST00000472326 ST3GAL3Q11203 375 aa4.38□□□□□ -1.71
SGCE-210ENST00000472326 AANATQ16613 207 aa4.38□□□□□ -1.71
SGCE-210ENST00000472326 DCST2Q5T1A1 773 aa4.38□□□□□ -1.71
SGCE-210ENST00000472326 PVRIGQ6DKI7 326 aa4.38□□□□□ -1.71
SGCE-210ENST00000472326 SCYL2Q6P3W7 929 aa4.38□□□□□ -1.71
SGCE-210ENST00000472326 PPP1R27Q86WC6 154 aa4.38□□□□□ -1.71
SGCE-210ENST00000472326 ELMOD2Q8IZ81 293 aa4.38□□□□□ -1.71
SGCE-210ENST00000472326 ALLCQ8N6M5 410 aa4.38□□□□□ -1.71
SGCE-210ENST00000472326 ZSCAN4Q8NAM6 433 aaPredicted RBP4.38□□□□□ -1.71
SGCE-210ENST00000472326 DCUN1D4Q92564 292 aa4.38□□□□□ -1.71
SGCE-210ENST00000472326 MARCH5Q9NX47 278 aa4.38□□□□□ -1.71
SGCE-210ENST00000472326 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.38□□□□□ -1.71
SGCE-210ENST00000472326 XPO7Q9UIA9 1087 aaKnown RBP4.38□□□□□ -1.71
SGCE-210ENST00000472326 SMIM28A0A1B0GU29 152 aa4.37□□□□□ -1.71
SGCE-210ENST00000472326 TRIM49D1C9J1S8 452 aa4.37□□□□□ -1.71
SGCE-210ENST00000472326 STX11O75558 287 aa4.37□□□□□ -1.71
SGCE-210ENST00000472326 MT-ND3P03897 115 aa4.37□□□□□ -1.71
SGCE-210ENST00000472326 HPNP05981 417 aa4.37□□□□□ -1.71
SGCE-210ENST00000472326 ETS1P14921 441 aa4.37□□□□□ -1.71
SGCE-210ENST00000472326 GABRR1P24046 479 aa4.37□□□□□ -1.71
SGCE-210ENST00000472326 GCKP35557 465 aa4.37□□□□□ -1.71
SGCE-210ENST00000472326 ZNF630Q2M218 657 aaPredicted RBP4.37□□□□□ -1.71
SGCE-210ENST00000472326 ZNF100Q8IYN0 542 aa4.37□□□□□ -1.71
SGCE-210ENST00000472326 STKLD1Q8NE28 680 aa4.37□□□□□ -1.71
SGCE-210ENST00000472326 ANKRD20A12PQ8NF67 263 aa4.37□□□□□ -1.71
SGCE-210ENST00000472326 FAM104AQ969W3 186 aa4.37□□□□□ -1.71
SGCE-210ENST00000472326 SMIM14Q96QK8 99 aa4.37□□□□□ -1.71
SGCE-210ENST00000472326 RIMS3Q9UJD0 308 aa4.37□□□□□ -1.71
SGCE-210ENST00000472326 KNSTRNQ9Y448 316 aa4.37□□□□□ -1.71
SGCE-210ENST00000472326 FAM74A7A6NL05 159 aa4.36□□□□□ -1.71
SGCE-210ENST00000472326 ABCD4O14678 606 aa4.36□□□□□ -1.71
SGCE-210ENST00000472326 TGFAP01135 160 aa4.36□□□□□ -1.71
SGCE-210ENST00000472326 CHRNA1P02708 482 aa4.36□□□□□ -1.71
SGCE-210ENST00000472326 BCKDHAP12694 445 aa4.36□□□□□ -1.71
SGCE-210ENST00000472326 TLE4Q04727 773 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms