RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 NKX2-6A6NCS4 301 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 CCDC154A6NI56 674 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 CD8B2A6NJW9 211 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 NPIPA7E9PJI5 369 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 HNRNPRO43390 633 aaKnown RBP8.29□□□□□ -1.08
SYN3-211ENST00000472027 TGDSO95455 350 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 C1QCP02747 245 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 IL6P05231 212 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 NPIPA8P0DM63 369 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 MSX1P28360 303 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 TIMP3P35625 211 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 IDH3AP50213 366 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 LHX2P50458 406 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 ATP12AP54707 1039 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 SRYQ05066 204 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 BCL2A1Q16548 175 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 ARHGAP11BQ3KRB8 267 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 GLYR1Q49A26 553 aaPredicted RBP8.29□□□□□ -1.08
SYN3-211ENST00000472027 FLYWCH1Q4VC44 716 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 KLHL26Q53HC5 615 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 NSUN5P2Q63ZY6 315 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 SAXO2Q658L1 398 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 ARSKQ6UWY0 536 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 LACC1Q8IV20 430 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 LIX1LQ8IVB5 337 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 MISPQ8IVT2 679 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 CHDHQ8NE62 594 aaPredicted RBP8.29□□□□□ -1.08
SYN3-211ENST00000472027 TNIP2Q8NFZ5 429 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 OR5M1Q8NGP8 315 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 MIPOL1Q8TD10 442 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 XAGE5Q8WWM1 108 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 C1GALT1C1Q96EU7 318 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 MAGEB18Q96M61 343 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 CCDC115Q96NT0 180 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 PANX1Q96RD7 426 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 TUBA1CQ9BQE3 449 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 EBF4Q9BQW3 602 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 SLC35A5Q9BS91 424 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 INPP5KQ9BT40 448 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 CALHM2Q9HA72 323 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 HHATLQ9HCP6 504 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 KCNJ16Q9NPI9 418 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 SDR39U1Q9NRG7 319 aaPredicted RBP8.29□□□□□ -1.08
SYN3-211ENST00000472027 ZIM2Q9NZV7 527 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 ZNF337Q9Y3M9 751 aa8.29□□□□□ -1.08
SYN3-211ENST00000472027 OR2M5A3KFT3 312 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 FAM90A27PA6NNH2 459 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 HSPB2A8KAH6 182 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 H0Y3Z8 333 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 LINC01387J3KSC0 135 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 FCMRO60667 390 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 STX11O75558 287 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 AK1P00568 194 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 IL2RAP01589 272 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 GSNP06396 782 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 SNRPB2P08579 225 aaKnown RBP8.28□□□□□ -1.08
SYN3-211ENST00000472027 OR12D1P0DN82 309 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 PEPDP12955 493 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 ZNF708P17019 499 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 CEACAM8P31997 349 aaPredicted RBP8.28□□□□□ -1.08
SYN3-211ENST00000472027 CHI3L1P36222 383 aaPredicted RBP8.28□□□□□ -1.08
SYN3-211ENST00000472027 CDKN2CP42773 168 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 AQP5P55064 265 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 CLDN18P56856 261 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 LRRC74AQ0VAA2 488 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 RCAN2Q14206 197 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 GPR68Q15743 365 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 CD226Q15762 336 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 HSPB2Q16082 182 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.28□□□□□ -1.08
SYN3-211ENST00000472027 RAET1LQ5VY80 246 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 HEPHL1Q6MZM0 1159 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 TNFAIP8L2Q6P589 184 aaPredicted RBP8.28□□□□□ -1.08
SYN3-211ENST00000472027 ZNF621Q6ZSS3 439 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 MTERF4Q7Z6M4 381 aaKnown RBP8.28□□□□□ -1.08
SYN3-211ENST00000472027 ADGRE4PQ86SQ3 457 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 MIER2Q8N344 545 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 TRIML2Q8N7C3 387 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 ZNF527Q8NB42 609 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 NAXEQ8NCW5 288 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 PHOSPHO1Q8TCT1 267 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 RAB8BQ92930 207 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 MARVELD3Q96A59 401 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 NEURL3Q96EH8 262 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 SH3YL1Q96HL8 342 aaPredicted RBP8.28□□□□□ -1.08
SYN3-211ENST00000472027 PIGQQ9BRB3 760 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 CCDC28BQ9BUN5 200 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 ACBD3Q9H3P7 528 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 TCF7L2Q9NQB0 619 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 EXD2Q9NVH0 621 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 ZNF446Q9NWS9 450 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 VDAC3Q9Y277 283 aa8.28□□□□□ -1.08
SYN3-211ENST00000472027 NCOA6Q14686 2063 aaPredicted RBP8.28□□□□□ -1.08
SYN3-211ENST00000472027 A0A087WZY1 265 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 MBD3L4A6NDZ8 208 aaPredicted RBP8.27□□□□□ -1.09
SYN3-211ENST00000472027 MBD3L3A6NE82 208 aaPredicted RBP8.27□□□□□ -1.09
SYN3-211ENST00000472027 MBD3L5A6NJ08 208 aaPredicted RBP8.27□□□□□ -1.09
SYN3-211ENST00000472027 CLCA1A8K7I4 914 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 SHISA8B8ZZ34 492 aa8.27□□□□□ -1.09
SYN3-211ENST00000472027 NPIPB9F8W1W9 429 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms