RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 LCA5Q86VQ0 697 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 TDRPQ86YL5 185 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 CCDC63Q8NA47 563 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 NUP43Q8NFH3 380 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 ROBO4Q8WZ75 1007 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 FAM120BQ96EK7 910 aaKnown RBP7.25□□□□□ -1.25
USP48-207ENST00000471752 ADGRG7Q96K78 797 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 FAM111AQ96PZ2 611 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 TM9SF2Q99805 663 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 C1orf50Q9BV19 199 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 REEP4Q9H6H4 257 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 CXorf36Q9H7Y0 433 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 MIEF1Q9NQG6 463 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 RRAGDQ9NQL2 400 aaPredicted RBP7.25□□□□□ -1.25
USP48-207ENST00000471752 FAM120CQ9NX05 1096 aaKnown RBP7.25□□□□□ -1.25
USP48-207ENST00000471752 GIN1Q9NXP7 522 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 ZDHHC2Q9UIJ5 367 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 PACSIN3Q9UKS6 424 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 GRID1Q9ULK0 1009 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 TESMINQ9Y4I5 508 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 TRAF6Q9Y4K3 522 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 STAB1Q9NY15 2570 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 MXRA5Q9NR99 2828 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 SVEP1Q4LDE5 3571 aa7.25□□□□□ -1.25
USP48-207ENST00000471752 IGLV3-32A0A0A0MS00 114 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 CENPVL1A0A0U1RR11 272 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 A0A1W2PRB8 838 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 C9JVG2 144 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 EIF1AYO14602 144 aaKnown RBP7.24□□□□□ -1.25
USP48-207ENST00000471752 CTIFO43310 598 aaKnown RBP7.24□□□□□ -1.25
USP48-207ENST00000471752 KLF4O43474 513 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 CXCL13O43927 109 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 TRIM13O60858 407 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 CDH16O75309 829 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 BCAS1O75363 584 aaPredicted RBP7.24□□□□□ -1.25
USP48-207ENST00000471752 CRCPO75575 148 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 RAF1P04049 648 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 PEPDP12955 493 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 PRPH2P23942 346 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 NTSP30990 170 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 UGT2B10P36537 528 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 CD79BP40259 229 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 FRKP42685 505 aaPredicted RBP7.24□□□□□ -1.25
USP48-207ENST00000471752 MANFP55145 182 aaKnown RBP7.24□□□□□ -1.25
USP48-207ENST00000471752 RPS26P62854 115 aaKnown RBP7.24□□□□□ -1.25
USP48-207ENST00000471752 PRR5P85299 388 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 SORDQ00796 357 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 KEAP1Q14145 624 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 MPP2Q14168 576 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 CCDC153Q494R4 210 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 FBXW10Q5XX13 1052 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 PPP4R4Q6NUP7 873 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 AAGABQ6PD74 315 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 P4HA3Q7Z4N8 544 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 HMGN2P46Q86SG4 172 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 TRABD2AQ86V40 505 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 KIF18BQ86Y91 864 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 PPP1R14CQ8TAE6 165 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 FAM76AQ8TAV0 307 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 CDS1Q92903 461 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 NINJ1Q92982 152 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 ZNF775Q96BV0 537 aaPredicted RBP7.24□□□□□ -1.25
USP48-207ENST00000471752 MBD6Q96DN6 1003 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 PIK3IP1Q96FE7 263 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 PKNOX2Q96KN3 472 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 PPP1R36Q96LQ0 422 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 DACH2Q96NX9 599 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 ALPK1Q96QP1 1244 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 C20orf27Q9GZN8 174 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 STMN4Q9H169 189 aaPredicted RBP7.24□□□□□ -1.25
USP48-207ENST00000471752 SERHL2Q9H4I8 314 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 RNF122Q9H9V4 155 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 NEUROD4Q9HD90 331 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 Q9N2J8 555 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 MED17Q9NVC6 651 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 NTMQ9P121 344 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.24□□□□□ -1.25
USP48-207ENST00000471752 KCNE5Q9UJ90 142 aa7.24□□□□□ -1.25
USP48-207ENST00000471752 V9GYY5 206 aaPredicted RBP7.24□□□□□ -1.25
USP48-207ENST00000471752 NUP214P35658 2090 aaPredicted RBP7.24□□□□□ -1.25
USP48-207ENST00000471752 CUBNO60494 3623 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 TRIM64A6NGJ6 449 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 TRIM64BA6NI03 449 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 ALG1L2C9J202 215 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 SLC28A1O00337 649 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 TNFSF11O14788 317 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 MSTNO14793 375 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 EMC8O43402 210 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 COQ9O75208 318 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 TNFRSF21O75509 655 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 C6orf47O95873 294 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 HMGN2P05204 90 aaKnown RBP7.23□□□□□ -1.25
USP48-207ENST00000471752 FGF4P08620 206 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 TBXA2RP21731 343 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 GPC1P35052 558 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 EIF1AXP47813 144 aaKnown RBP7.23□□□□□ -1.25
USP48-207ENST00000471752 PHC1P78364 1004 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 ZNF117Q03924 483 aa7.23□□□□□ -1.25
USP48-207ENST00000471752 SF3B4Q15427 424 aaKnown RBP eCLIP7.23□□□□□ -1.254e-7■■■■□ 20.8
USP48-207ENST00000471752 C6orf136Q5SQH8 315 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms