RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 RAP2CQ9Y3L5 183 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 DNAJC15Q9Y5T4 150 aa12.26□□□□□ -0.45
HMGN1-211ENST00000471260 PDZD2O15018 2839 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 DCHS2Q6V1P9 2916 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 LINC01387J3KSC0 135 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 ZNF195O14628 629 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 HSPA4LO95757 839 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 TACR1P25103 407 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 FRKP42685 505 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-211ENST00000471260 KIR2DL3P43628 341 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 ASMTP46597 345 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 IDH3AP50213 366 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 ZNF136P52737 540 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 DSCR4P56555 118 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-211ENST00000471260 GAB1Q13480 694 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 GANABQ14697 944 aaKnown RBP12.25□□□□□ -0.45
HMGN1-211ENST00000471260 C1orf146Q5VVC0 180 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 POMZP3Q6PJE2 187 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 EPGNQ6UW88 154 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 ZCCHC23Q6ZST2 131 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 R3HCC1LQ7Z5L2 792 aaKnown RBP12.25□□□□□ -0.45
HMGN1-211ENST00000471260 KIF18BQ86Y91 864 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 OR4N2Q8NGD1 307 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 CEP70Q8NHQ1 597 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 HOXB13Q92826 284 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-211ENST00000471260 WNT2BQ93097 391 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 MTERF3Q96E29 417 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 TM9SF2Q99805 663 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 C20orf27Q9GZN8 174 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 TUBB1Q9H4B7 451 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 REEP4Q9H6H4 257 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 ACSS1Q9NUB1 689 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-211ENST00000471260 PPP4R1LQ9P1A2 415 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 MARCOQ9UEW3 520 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-211ENST00000471260 SLC7A8Q9UHI5 535 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 FBXL2Q9UKC9 423 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 TRAF6Q9Y4K3 522 aa12.25□□□□□ -0.45
HMGN1-211ENST00000471260 KDM4EB2RXH2 506 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-211ENST00000471260 LSM1O15116 133 aaKnown RBP12.24□□□□□ -0.45
HMGN1-211ENST00000471260 PDPK1O15530 556 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 FADS1O60427 444 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 ZIC3O60481 467 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 NME6O75414 186 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-211ENST00000471260 RCBTB2O95199 551 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 KCNH1O95259 989 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 IL33O95760 270 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 KITP10721 976 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 PRPS2P11908 318 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 ANPEPP15144 967 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 SDC1P18827 310 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 DPP4P27487 766 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 UQCRC1P31930 480 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 PDE7AQ13946 482 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 VPS26BQ4G0F5 336 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 RFTN2Q52LD8 501 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-211ENST00000471260 PGM2L1Q6PCE3 622 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 TMEM200AQ86VY9 491 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 FADS6Q8N9I5 356 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 OR4K17Q8NGC6 315 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 OR2T11Q8NH01 316 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 GOT1L1Q8NHS2 421 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-211ENST00000471260 WDR60Q8WVS4 1066 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 PPCDCQ96CD2 204 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 SFXN2Q96NB2 322 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 TUBA1CQ9BQE3 449 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 EBF4Q9BQW3 602 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 THTPAQ9BU02 230 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 SFXN3Q9BWM7 321 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 PTGES2Q9H7Z7 377 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 FAM120CQ9NX05 1096 aaKnown RBP12.24□□□□□ -0.45
HMGN1-211ENST00000471260 JKAMPQ9P055 326 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 NTMQ9P121 344 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 DKKL1Q9UK85 242 aa12.24□□□□□ -0.45
HMGN1-211ENST00000471260 FAM221AA4D161 298 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 MAGEA13PA6NCF6 341 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 HDAC3O15379 428 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 ITM2AO43736 263 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 LYPLA1O75608 230 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-211ENST00000471260 CTAG2O75638 210 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 GOSR1O95249 250 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 LINC00032P0C843 101 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 TMIGD3P0DMS9 266 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-211ENST00000471260 PEPDP12955 493 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 ZNF708P17019 499 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 MAPK1P28482 360 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 RPL3P39023 403 aaKnown RBP12.23□□□□□ -0.45
HMGN1-211ENST00000471260 MAP3K8P41279 467 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 LHX2P50458 406 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 DGKQP52824 942 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 MANFP55145 182 aaKnown RBP12.23□□□□□ -0.45
HMGN1-211ENST00000471260 WNT3P56703 355 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 EEFSECP57772 596 aaKnown RBP12.23□□□□□ -0.45
HMGN1-211ENST00000471260 RPL38P63173 70 aaKnown RBP12.23□□□□□ -0.45
HMGN1-211ENST00000471260 SORDQ00796 357 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 C17orf67Q0P5P2 114 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 HSPB3Q12988 150 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 MLC1Q15049 377 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 TESK1Q15569 626 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 UGT3A2Q3SY77 523 aa12.23□□□□□ -0.45
HMGN1-211ENST00000471260 GLYR1Q49A26 553 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms