RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 ENPP7Q6UWV6 458 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 UNQ6494/PRO21346Q6UXR6 183 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 SLC29A4Q7RTT9 530 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 HSD17B13Q7Z5P4 300 aaPredicted RBP9.35□□□□□ -0.91
NUP50-214ENST00000469163 DNAJC22Q8N4W6 341 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 DOK4Q8TEW6 326 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 RTP4Q96DX8 246 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 TRPM6Q9BX84 2022 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 GPR174Q9BXC1 333 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 LRRC3Q9BY71 257 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 IRAK3Q9Y616 596 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 UNC13CQ8NB66 2214 aa9.35□□□□□ -0.91
NUP50-214ENST00000469163 IGLV3-10A0A075B6K4 115 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 LOC105369274A0A096LPK9 316 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 SMIM30A4D0T7 59 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 L7N2F9 121 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 S1PR4O95977 384 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 RPS2P15880 293 aaKnown RBP9.34□□□□□ -0.91
NUP50-214ENST00000469163 EPB42P16452 691 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 CXCL3P19876 107 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 DDTP30046 118 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 BMP8BP34820 402 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 CLDN20P56880 219 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 MPPED2Q15777 294 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.34□□□□□ -0.91
NUP50-214ENST00000469163 BMP8AQ7Z5Y6 402 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 TRIM69Q86WT6 500 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 SERPINA12Q8IW75 414 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 ZNF683Q8IZ20 524 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 OR4N4Q8N0Y3 316 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 FAM122AQ96E09 287 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 ELMOD3Q96FG2 381 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 MACROD1Q9BQ69 325 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 CHIAQ9BZP6 476 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 C11orf16Q9NQ32 467 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 DZANK1Q9NVP4 752 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 CMAHPQ9Y471 501 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.34□□□□□ -0.91
NUP50-214ENST00000469163 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.34□□□□□ -0.91
NUP50-214ENST00000469163 GNG14A0A1W2PPG7 69 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 A0A1W2PQU0 124 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 OR2W5A6NFC9 320 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 OR52A4PA6NMU1 304 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 WNT9AO14904 365 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 TOX3O15405 576 aaPredicted RBP9.34□□□□□ -0.91
NUP50-214ENST00000469163 DLX3O60479 287 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 OR56A5P0C7T3 313 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 LINC00271P0C7V0 271 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 GSK3BP49841 420 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 NUTF2P61970 127 aaKnown RBP9.34□□□□□ -0.91
NUP50-214ENST00000469163 ILKQ13418 452 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 NCMAPQ5T1S8 102 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 HIST2H2AA3Q6FI13 130 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 HEPHL1Q6MZM0 1159 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 IL27RAQ6UWB1 636 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 UBE2R2Q712K3 238 aaPredicted RBP9.34□□□□□ -0.91
NUP50-214ENST00000469163 FJX1Q86VR8 437 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 LDLRAD3Q86YD5 345 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 OR11H7Q8NGC8 314 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 UBXN10Q96LJ8 280 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 CCNL2Q96S94 520 aaPredicted RBP9.34□□□□□ -0.91
NUP50-214ENST00000469163 MTERF1Q99551 399 aaKnown RBP9.34□□□□□ -0.91
NUP50-214ENST00000469163 CCDC86Q9H6F5 360 aaKnown RBP9.34□□□□□ -0.91
NUP50-214ENST00000469163 SEBOXQ9HB31 216 aaPredicted RBP9.34□□□□□ -0.91
NUP50-214ENST00000469163 GULP1Q9UBP9 304 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 RPH3ALQ9UNE2 315 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 PLEKHM1Q9Y4G2 1056 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 TSTD3H0UI37 97 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 M0R082 166 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 MITFO75030 526 aaPredicted RBP9.34□□□□□ -0.91
NUP50-214ENST00000469163 SOX30O94993 753 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 PRNPP04156 253 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 CBSLP0DN79 551 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 ZNF14P17017 642 aaPredicted RBP9.34□□□□□ -0.91
NUP50-214ENST00000469163 NOS3P29474 1203 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 CBSP35520 551 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 STC1P52823 247 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 HMGCS1Q01581 520 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 NAE1Q13564 534 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 ZSWIM7Q19AV6 140 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 SLC30A6Q6NXT4 461 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 Q8N402 240 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 OR9A1PQ8NGU1 263 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 ROBO4Q8WZ75 1007 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 TPD52L3Q96J77 140 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 ASPNQ9BXN1 380 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 WDR26Q9H7D7 661 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 C3orf14Q9HBI5 128 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 ZSCAN32Q9NX65 697 aa9.34□□□□□ -0.91
NUP50-214ENST00000469163 TNRC18O15417 2968 aaPredicted RBP9.34□□□□□ -0.92
NUP50-214ENST00000469163 SSNA1O43805 119 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 UGDHO60701 494 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 KRT33AO76009 404 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 RECKO95980 971 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 UMPSP11172 480 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 ITGA3P26006 1051 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 PRDX3P30048 256 aaKnown RBP9.33□□□□□ -0.92
NUP50-214ENST00000469163 AKR1C2P52895 323 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 AKR1C1Q04828 323 aa9.33□□□□□ -0.92
NUP50-214ENST00000469163 ECH1Q13011 328 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms