RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 MAPK13O15264 365 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 PPIHO43447 177 aaKnown RBP3.93□□□□□ -1.78
LSM5-209ENST00000468872 HPP00738 406 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 JCHAINP01591 159 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 PIGRP01833 764 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 PCCBP05166 539 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 ASNSP08243 561 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 IGFBP1P08833 259 aaPredicted RBP3.93□□□□□ -1.78
LSM5-209ENST00000468872 ANXA3P12429 323 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 XRCC1P18887 633 aaPredicted RBP3.93□□□□□ -1.78
LSM5-209ENST00000468872 IDSP22304 550 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 HMGCS2P54868 508 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 TAF7Q15545 349 aaPredicted RBP3.93□□□□□ -1.78
LSM5-209ENST00000468872 TCTEX1D4Q5JR98 221 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 NCR3LG1Q68D85 454 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 ZNF600Q6ZNG1 722 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 CENPUQ71F23 418 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 CEACAM19Q7Z692 300 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 PARGQ86W56 976 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 SPAG16Q8N0X2 631 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 OR10T2Q8NGX3 314 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 OR2L2Q8NH16 312 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 FAM222BQ8WU58 562 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 C1orf147Q96MC9 270 aaPredicted RBP3.93□□□□□ -1.78
LSM5-209ENST00000468872 CASD1Q96PB1 797 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 RANBP9Q96S59 729 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 TMEM121Q9BTD3 319 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 TPPP3Q9BW30 176 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 COMMD4Q9H0A8 199 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 PALMDQ9NP74 551 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 CHRNA9Q9UGM1 479 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 DUSP12Q9UNI6 340 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 RNF6Q9Y252 685 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 EIF3LQ9Y262 564 aaKnown RBP3.93□□□□□ -1.78
LSM5-209ENST00000468872 CSAG2Q9Y5P2 127 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 MAP3K1Q13233 1512 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.93□□□□□ -1.78
LSM5-209ENST00000468872 ABCA10Q8WWZ4 1543 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 GRIN2DO15399 1336 aa3.93□□□□□ -1.78
LSM5-209ENST00000468872 ATP10BO94823 1461 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 CAMSAP2Q08AD1 1489 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 DHX57Q6P158 1386 aaKnown RBP3.92□□□□□ -1.78
LSM5-209ENST00000468872 ANGPT2O15123 496 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 DUX1O43812 170 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 JAK2O60674 1132 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 SRPX2O60687 465 aaPredicted RBP3.92□□□□□ -1.78
LSM5-209ENST00000468872 ZNF354AO60765 605 aaPredicted RBP3.92□□□□□ -1.78
LSM5-209ENST00000468872 RAMP1O60894 148 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 KRT8P05787 483 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 ALPIP09923 528 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 EPB41P11171 864 aaKnown RBP3.92□□□□□ -1.78
LSM5-209ENST00000468872 SDC1P18827 310 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 DRD5P21918 477 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 HTR2AP28223 471 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 SOX6P35712 828 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 RPL4P36578 427 aaKnown RBP3.92□□□□□ -1.78
LSM5-209ENST00000468872 OR1D4P47884 311 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 ACADVLP49748 655 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 ARHGDIBP52566 201 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 IST1P53990 364 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 PLOD1Q02809 727 aaPredicted RBP3.92□□□□□ -1.78
LSM5-209ENST00000468872 MICAQ29983 383 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 CYS1Q717R9 158 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 UNC5CLQ8IV45 518 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 CNPY4Q8N129 248 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 ZNF540Q8NDQ6 660 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 ZBED6CLQ96FA7 236 aaPredicted RBP3.92□□□□□ -1.78
LSM5-209ENST00000468872 GSDMCQ9BYG8 508 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 TIGARQ9NQ88 270 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 SF3B1O75533 1304 aaKnown RBP eCLIP3.92□□□□□ -1.783e-7■■■■■ 27.3
LSM5-209ENST00000468872 A2ML1A8K2U0 1454 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 MED14O60244 1454 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 A2MP01023 1474 aa3.92□□□□□ -1.78
LSM5-209ENST00000468872 CARMIL1Q5VZK9 1371 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 EFCAB6Q5THR3 1501 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 KDM5DQ9BY66 1539 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 ESYT2A0FGR8 921 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 ZSCAN5BA6NJL1 495 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 LCMT2O60294 686 aaKnown RBP3.91□□□□□ -1.78
LSM5-209ENST00000468872 IDH1O75874 414 aaKnown RBP3.91□□□□□ -1.78
LSM5-209ENST00000468872 MFN2O95140 757 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 ANP32DO95626 131 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 CSF2P04141 144 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 LAMP1P11279 417 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 OSTNP61366 133 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 NUCB2P80303 420 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 IL18R1Q13478 541 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 SLC10A1Q14973 349 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 CHI3L2Q15782 390 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 SLC22A6Q4U2R8 563 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 EIPR1Q53HC9 387 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 LGSNQ5TDP6 509 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 SPINK14Q6IE38 97 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 STAC2Q6ZMT1 411 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 HSD11B1LQ7Z5J1 315 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 NAXDQ8IW45 347 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 OR2T34Q8NGX1 318 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 NANPQ8TBE9 248 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 THRSPQ92748 146 aa3.91□□□□□ -1.78
LSM5-209ENST00000468872 C18orf25Q96B23 403 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms