RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 POM121L2Q96KW2 1035 aa3.37□□□□□ -1.87
SMC4-208ENST00000467468 NPY6RQ99463 290 aa3.37□□□□□ -1.87
SMC4-208ENST00000467468 CCDC77Q9BR77 488 aa3.37□□□□□ -1.87
SMC4-208ENST00000467468 DUSP16Q9BY84 665 aa3.37□□□□□ -1.87
SMC4-208ENST00000467468 TRIM15Q9C019 465 aa3.37□□□□□ -1.87
SMC4-208ENST00000467468 UPF3AQ9H1J1 476 aaKnown RBP3.37□□□□□ -1.87
SMC4-208ENST00000467468 RNF41Q9H4P4 317 aaPredicted RBP3.37□□□□□ -1.87
SMC4-208ENST00000467468 AIPL1Q9NZN9 384 aa3.37□□□□□ -1.87
SMC4-208ENST00000467468 THEGQ9P2T0 379 aa3.37□□□□□ -1.87
SMC4-208ENST00000467468 PCSK1NQ9UHG2 260 aa3.37□□□□□ -1.87
SMC4-208ENST00000467468 NPIPA1Q9UND3 350 aa3.37□□□□□ -1.87
SMC4-208ENST00000467468 CPQQ9Y646 472 aa3.37□□□□□ -1.87
SMC4-208ENST00000467468 AUP1Q9Y679 476 aa3.37□□□□□ -1.87
SMC4-208ENST00000467468 NSD2O96028 1365 aa3.37□□□□□ -1.87
SMC4-208ENST00000467468 KANK1Q14678 1352 aa3.37□□□□□ -1.87
SMC4-208ENST00000467468 TEX48A0A1B0GUV7 120 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 CTAGE15A4D2H0 777 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 FOXI3A8MTJ6 420 aaPredicted RBP3.36□□□□□ -1.87
SMC4-208ENST00000467468 ZNF264O43296 627 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 IDH3BO43837 385 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 FCMRO60667 390 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 SCGNO76038 276 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 SERPINA3P01011 423 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 IGHV3-9P01782 118 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 HBQ1P09105 142 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 H2BFMP0C1H6 154 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 TRIM49P0CI25 452 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 TRIM49CP0CI26 452 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 DPEP1P16444 411 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 UGT1A4P22310 534 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 SPRP35270 261 aaPredicted RBP3.36□□□□□ -1.87
SMC4-208ENST00000467468 HPCAL1P37235 193 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 BDKRB1P46663 353 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 AP3M2P53677 418 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 ATP5IP56385 69 aaPredicted RBP3.36□□□□□ -1.87
SMC4-208ENST00000467468 PLOD1Q02809 727 aaPredicted RBP3.36□□□□□ -1.87
SMC4-208ENST00000467468 RGS1Q08116 209 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 FGL1Q08830 312 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 CUL2Q13617 745 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 NECTIN1Q15223 517 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 SLC1A5Q15758 541 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 SNAI3Q3KNW1 292 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 FAM182AQ5T1J6 154 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 REP15Q6BDI9 236 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 ACSM5Q6NUN0 579 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 METTL7BQ6UX53 244 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 ACOT1Q86TX2 421 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 CTAGE6Q86UF2 777 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 IFNEQ86WN2 208 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 SLC22A9Q8IVM8 553 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 PHC2Q8IXK0 858 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 SLC38A6Q8IZM9 456 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 TMEM123Q8N131 208 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 ARL14Q8N4G2 192 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 SUMF1Q8NBK3 374 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 STXBP6Q8NFX7 210 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 OR52K2Q8NGK3 314 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 OR1F12Q8NHA8 337 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 TBCKQ8TEA7 893 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 CRYGNQ8WXF5 182 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 GTF3AQ92664 365 aaKnown RBP3.36□□□□□ -1.87
SMC4-208ENST00000467468 ZNF689Q96CS4 500 aaPredicted RBP3.36□□□□□ -1.87
SMC4-208ENST00000467468 CNOT6LQ96LI5 555 aaKnown RBP3.36□□□□□ -1.87
SMC4-208ENST00000467468 C12orf66Q96MD2 445 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 SLC6A7Q99884 636 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 ATF6BQ99941 703 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 SLC39A3Q9BRY0 314 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 FGFBP2Q9BYJ0 223 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 UBXN6Q9BZV1 441 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 ABCC13Q9NSE7 274 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 CDH9Q9ULB4 789 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 BARX2Q9UMQ3 279 aaPredicted RBP3.36□□□□□ -1.87
SMC4-208ENST00000467468 MAD1L1Q9Y6D9 718 aa3.36□□□□□ -1.87
SMC4-208ENST00000467468 IGHV3OR16-12A0A075B7B8 117 aa3.35□□□□□ -1.87
SMC4-208ENST00000467468 HELTA6NFD8 242 aa3.35□□□□□ -1.87
SMC4-208ENST00000467468 FAM47DPA6NHR8 397 aa3.35□□□□□ -1.87
SMC4-208ENST00000467468 ERI2A8K979 691 aaKnown RBP3.35□□□□□ -1.87
SMC4-208ENST00000467468 SOCS3O14543 225 aa3.35□□□□□ -1.87
SMC4-208ENST00000467468 MSH4O15457 936 aa3.35□□□□□ -1.87
SMC4-208ENST00000467468 TRIM3O75382 744 aaPredicted RBP3.35□□□□□ -1.87
SMC4-208ENST00000467468 F10P00742 488 aa3.35□□□□□ -1.87
SMC4-208ENST00000467468 PNMTP11086 282 aa3.35□□□□□ -1.87
SMC4-208ENST00000467468 TOP1P11387 765 aaKnown RBP3.35□□□□□ -1.87
SMC4-208ENST00000467468 SDC1P18827 310 aa3.35□□□□□ -1.87
SMC4-208ENST00000467468 ZNF10P21506 573 aaPredicted RBP3.35□□□□□ -1.87
SMC4-208ENST00000467468 PCMT1P22061 227 aa3.35□□□□□ -1.87
SMC4-208ENST00000467468 ATP5A1P25705 553 aaKnown RBP3.35□□□□□ -1.87
SMC4-208ENST00000467468 LMO2P25791 158 aa3.35□□□□□ -1.87
SMC4-208ENST00000467468 CASP4P49662 377 aa3.35□□□□□ -1.87
SMC4-208ENST00000467468 ATP4BP51164 291 aa3.35□□□□□ -1.87
SMC4-208ENST00000467468 NOVA1P51513 510 aaKnown RBP3.35□□□□□ -1.87
SMC4-208ENST00000467468 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
SMC4-208ENST00000467468 RIPPLY1Q0D2K3 151 aa3.35□□□□□ -1.87
SMC4-208ENST00000467468 TMEM52BQ4KMG9 183 aa3.35□□□□□ -1.87
SMC4-208ENST00000467468 C14orf28Q4W4Y0 310 aa3.35□□□□□ -1.87
SMC4-208ENST00000467468 VWA2Q5GFL6 755 aa3.35□□□□□ -1.87
SMC4-208ENST00000467468 MS4A13Q5J8X5 152 aa3.35□□□□□ -1.87
SMC4-208ENST00000467468 PRSS48Q7RTY5 328 aa3.35□□□□□ -1.87
SMC4-208ENST00000467468 MOB3BQ86TA1 216 aa3.35□□□□□ -1.87
SMC4-208ENST00000467468 NBPF5PQ86XG9 351 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms