RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 NPIPA7E9PJI5 369 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 CLIC1O00299 241 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 SCDO00767 359 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 SLC22A2O15244 555 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 SNRPB2P08579 225 aaKnown RBP18.48■□□□□ 0.55
SKA3-205ENST00000465471 NPIPA8P0DM63 369 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 BMP2P12643 396 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 ABOP16442 354 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 ADSLP30566 484 aaPredicted RBP18.48■□□□□ 0.55
SKA3-205ENST00000465471 GNGT1P63211 74 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 KLF10Q13118 480 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 STX5Q13190 355 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 MAPK11Q15759 364 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 C3AR1Q16581 482 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 EIPR1Q53HC9 387 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 NHSL2Q5HYW2 709 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 OLIG3Q7RTU3 272 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 MISPQ8IVT2 679 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 ZNF527Q8NB42 609 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 DTNBP1Q96EV8 351 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 TRNT1Q96Q11 434 aaKnown RBP18.48■□□□□ 0.55
SKA3-205ENST00000465471 DSN1Q9H410 356 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 NDUFAF1Q9Y375 327 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 BAHCC1Q9P281 2608 aa18.48■□□□□ 0.55
SKA3-205ENST00000465471 ANGPT2O15123 496 aa18.47■□□□□ 0.55
SKA3-205ENST00000465471 NDUFB5O43674 189 aa18.47■□□□□ 0.55
SKA3-205ENST00000465471 SNX3O60493 162 aa18.47■□□□□ 0.55
SKA3-205ENST00000465471 SEMA7AO75326 666 aa18.47■□□□□ 0.55
SKA3-205ENST00000465471 TRAPPC6AO75865 159 aa18.47■□□□□ 0.55
SKA3-205ENST00000465471 ETFAP13804 333 aa18.47■□□□□ 0.55
SKA3-205ENST00000465471 FADDQ13158 208 aa18.47■□□□□ 0.55
SKA3-205ENST00000465471 GANABQ14697 944 aaKnown RBP18.47■□□□□ 0.55
SKA3-205ENST00000465471 RGNQ15493 299 aa18.47■□□□□ 0.55
SKA3-205ENST00000465471 SYPL1Q16563 259 aa18.47■□□□□ 0.55
SKA3-205ENST00000465471 EMC4Q5J8M3 183 aa18.47■□□□□ 0.55
SKA3-205ENST00000465471 WIPI1Q5MNZ9 446 aaPredicted RBP18.47■□□□□ 0.55
SKA3-205ENST00000465471 C1QL3Q5VWW1 255 aa18.47■□□□□ 0.55
SKA3-205ENST00000465471 MTERF4Q7Z6M4 381 aaKnown RBP18.47■□□□□ 0.55
SKA3-205ENST00000465471 FAM26EQ8N5C1 309 aa18.47■□□□□ 0.55
SKA3-205ENST00000465471 OR4K17Q8NGC6 315 aa18.47■□□□□ 0.55
SKA3-205ENST00000465471 ELAC2Q9BQ52 826 aaKnown RBP18.47■□□□□ 0.55
SKA3-205ENST00000465471 NSRP1Q9H0G5 558 aaKnown RBP18.47■□□□□ 0.55
SKA3-205ENST00000465471 RAD21L1Q9H4I0 556 aa18.47■□□□□ 0.55
SKA3-205ENST00000465471 LDAHQ9H6V9 325 aa18.47■□□□□ 0.55
SKA3-205ENST00000465471 MED11Q9P086 117 aa18.47■□□□□ 0.55
SKA3-205ENST00000465471 ERRFI1Q9UJM3 462 aaPredicted RBP18.47■□□□□ 0.55
SKA3-205ENST00000465471 TINAGQ9UJW2 476 aa18.47■□□□□ 0.55
SKA3-205ENST00000465471 MKLN1Q9UL63 735 aa18.47■□□□□ 0.55
SKA3-205ENST00000465471 SLC5A6Q9Y289 635 aa18.47■□□□□ 0.55
SKA3-205ENST00000465471 WDR45Q9Y484 360 aa18.47■□□□□ 0.55
SKA3-205ENST00000465471 DTNAQ9Y4J8 743 aa18.47■□□□□ 0.55
SKA3-205ENST00000465471 CENPVL1A0A0U1RR11 272 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 A0A1B0GUH1 482 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 FBP2O00757 339 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 BCKDKO14874 412 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 ZIC3O60481 467 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 UGT2B17O75795 530 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 H6PDO95479 791 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 CHRM4P08173 479 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 HPGDP15428 266 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 DSCR4P56555 118 aaPredicted RBP18.46■□□□□ 0.55
SKA3-205ENST00000465471 CRYZQ08257 329 aaKnown RBP18.46■□□□□ 0.55
SKA3-205ENST00000465471 COQ5Q5HYK3 327 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 LRRC74BQ6ZQY2 392 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 DHDDSQ86SQ9 333 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 CD163Q86VB7 1156 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 DOLPP1Q86YN1 238 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 ZNF619Q8N2I2 560 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 ANKFN1Q8N957 763 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 GATSQ8NAP1 163 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 SARAFQ96BY9 339 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 C1GALT1C1Q96EU7 318 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 SLC38A1Q9H2H9 487 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 IKZF5Q9H5V7 419 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 RUBCNLQ9H714 662 aa18.46■□□□□ 0.55
SKA3-205ENST00000465471 THUMPD1Q9NXG2 353 aaKnown RBP18.46■□□□□ 0.55
SKA3-205ENST00000465471 TRGV8A0A0C4DH27 118 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 NPIPA2E9PIF3 369 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 NPIPA3F8WFD2 350 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 PRRG2O14669 202 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 TNFRSF21O75509 655 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 TFPTP0C1Z6 253 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 PPIBP23284 216 aaKnown RBP18.45■□□□□ 0.54
SKA3-205ENST00000465471 DPP4P27487 766 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 MSX1P28360 303 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 ADH7P40394 386 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 CRATP43155 626 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 GFRA1P56159 465 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 DSTNP60981 165 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 CHRNEQ04844 493 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 GPR68Q15743 365 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 MAPK14Q16539 360 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 PDZK1Q5T2W1 519 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 VASNQ6EMK4 673 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 YRDCQ86U90 279 aaKnown RBP18.45■□□□□ 0.54
SKA3-205ENST00000465471 C10orf111Q8N326 155 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 PMM1Q92871 262 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 CPPED1Q9BRF8 314 aaPredicted RBP18.45■□□□□ 0.54
SKA3-205ENST00000465471 TAS2R10Q9NYW0 307 aa18.45■□□□□ 0.54
SKA3-205ENST00000465471 P2RX2Q9UBL9 471 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms