RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 UBA52P62987 128 aaKnown RBP8.24□□□□□ -1.09
APP-213ENST00000464867 PSPHP78330 225 aa8.24□□□□□ -1.09
APP-213ENST00000464867 IL13RA1P78552 427 aa8.24□□□□□ -1.09
APP-213ENST00000464867 TIAL1Q01085 375 aaKnown RBP eCLIP8.24□□□□□ -1.09
APP-213ENST00000464867 SNX1Q13596 522 aa8.24□□□□□ -1.09
APP-213ENST00000464867 MLC1Q15049 377 aa8.24□□□□□ -1.09
APP-213ENST00000464867 SPA17Q15506 151 aa8.24□□□□□ -1.09
APP-213ENST00000464867 ZSWIM7Q19AV6 140 aa8.24□□□□□ -1.09
APP-213ENST00000464867 HSP90AA5PQ58FG0 334 aa8.24□□□□□ -1.09
APP-213ENST00000464867 LGSNQ5TDP6 509 aa8.24□□□□□ -1.09
APP-213ENST00000464867 FAHD2BQ6P2I3 314 aaPredicted RBP8.24□□□□□ -1.09
APP-213ENST00000464867 Q6ZT83 130 aa8.24□□□□□ -1.09
APP-213ENST00000464867 LARP4Q71RC2 724 aaKnown RBP eCLIP8.24□□□□□ -1.09
APP-213ENST00000464867 GSTA5Q7RTV2 222 aa8.24□□□□□ -1.09
APP-213ENST00000464867 GALNT10Q86SR1 603 aa8.24□□□□□ -1.09
APP-213ENST00000464867 GGNQ86UU5 652 aa8.24□□□□□ -1.09
APP-213ENST00000464867 FADS6Q8N9I5 356 aa8.24□□□□□ -1.09
APP-213ENST00000464867 OR2M3Q8NG83 312 aa8.24□□□□□ -1.09
APP-213ENST00000464867 OR4K14Q8NGD5 310 aa8.24□□□□□ -1.09
APP-213ENST00000464867 ZNF473Q8WTR7 871 aaKnown RBP8.24□□□□□ -1.09
APP-213ENST00000464867 TMEM186Q96B77 213 aa8.24□□□□□ -1.09
APP-213ENST00000464867 MRRFQ96E11 262 aaKnown RBP8.24□□□□□ -1.09
APP-213ENST00000464867 SLC35A4Q96G79 324 aa8.24□□□□□ -1.09
APP-213ENST00000464867 FAHD2AQ96GK7 314 aa8.24□□□□□ -1.09
APP-213ENST00000464867 CCT8L2Q96SF2 557 aa8.24□□□□□ -1.09
APP-213ENST00000464867 SORBS1Q9BX66 1292 aaKnown RBP8.24□□□□□ -1.09
APP-213ENST00000464867 RAB1BQ9H0U4 201 aa8.24□□□□□ -1.09
APP-213ENST00000464867 MMP27Q9H306 513 aa8.24□□□□□ -1.09
APP-213ENST00000464867 TSPY26PQ9H489 355 aa8.24□□□□□ -1.09
APP-213ENST00000464867 NTN4Q9HB63 628 aa8.24□□□□□ -1.09
APP-213ENST00000464867 ZBTB26Q9HCK0 441 aa8.24□□□□□ -1.09
APP-213ENST00000464867 TIGARQ9NQ88 270 aa8.24□□□□□ -1.09
APP-213ENST00000464867 IARS2Q9NSE4 1012 aaKnown RBP8.24□□□□□ -1.09
APP-213ENST00000464867 ABHD10Q9NUJ1 306 aa8.24□□□□□ -1.09
APP-213ENST00000464867 NPAP1Q9NZP6 1156 aa8.24□□□□□ -1.09
APP-213ENST00000464867 MED11Q9P086 117 aa8.24□□□□□ -1.09
APP-213ENST00000464867 A0A1W2PR48 441 aa8.23□□□□□ -1.09
APP-213ENST00000464867 TCRBV7S2A1N4TA0A589 114 aa8.23□□□□□ -1.09
APP-213ENST00000464867 SDR42E2A6NKP2 422 aa8.23□□□□□ -1.09
APP-213ENST00000464867 GOLGA8MH3BSY2 632 aa8.23□□□□□ -1.09
APP-213ENST00000464867 M0R1B8 84 aa8.23□□□□□ -1.09
APP-213ENST00000464867 PIN1P1O15428 100 aa8.23□□□□□ -1.09
APP-213ENST00000464867 SCO2O43819 266 aa8.23□□□□□ -1.09
APP-213ENST00000464867 IL33O95760 270 aa8.23□□□□□ -1.09
APP-213ENST00000464867 FAM58BPP0C7Q3 252 aa8.23□□□□□ -1.09
APP-213ENST00000464867 ME2P23368 584 aa8.23□□□□□ -1.09
APP-213ENST00000464867 CASP2P42575 452 aa8.23□□□□□ -1.09
APP-213ENST00000464867 IRF8Q02556 426 aa8.23□□□□□ -1.09
APP-213ENST00000464867 SPOCK1Q08629 439 aa8.23□□□□□ -1.09
APP-213ENST00000464867 IKZF1Q13422 519 aa8.23□□□□□ -1.09
APP-213ENST00000464867 CCNIQ14094 377 aa8.23□□□□□ -1.09
APP-213ENST00000464867 PPP1R3AQ16821 1122 aa8.23□□□□□ -1.09
APP-213ENST00000464867 HBMQ6B0K9 141 aa8.23□□□□□ -1.09
APP-213ENST00000464867 B3GLCTQ6Y288 498 aa8.23□□□□□ -1.09
APP-213ENST00000464867 ESPNLQ6ZVH7 1005 aa8.23□□□□□ -1.09
APP-213ENST00000464867 TUSC5Q8IXB3 177 aa8.23□□□□□ -1.09
APP-213ENST00000464867 TCAIMQ8N3R3 496 aa8.23□□□□□ -1.09
APP-213ENST00000464867 ANKS4BQ8N8V4 417 aa8.23□□□□□ -1.09
APP-213ENST00000464867 FAM110BQ8TC76 370 aa8.23□□□□□ -1.09
APP-213ENST00000464867 UBE2FQ969M7 185 aa8.23□□□□□ -1.09
APP-213ENST00000464867 ZBTB8AQ96BR9 441 aa8.23□□□□□ -1.09
APP-213ENST00000464867 C1GALT1C1Q96EU7 318 aa8.23□□□□□ -1.09
APP-213ENST00000464867 WDR34Q96EX3 536 aa8.23□□□□□ -1.09
APP-213ENST00000464867 PDLIM5Q96HC4 596 aaKnown RBP8.23□□□□□ -1.09
APP-213ENST00000464867 OR51B5Q9H339 312 aa8.23□□□□□ -1.09
APP-213ENST00000464867 KLHL13Q9P2N7 655 aa8.23□□□□□ -1.09
APP-213ENST00000464867 ING1Q9UK53 422 aaPredicted RBP8.23□□□□□ -1.09
APP-213ENST00000464867 OARD1Q9Y530 152 aa8.23□□□□□ -1.09
APP-213ENST00000464867 ZCWPW2A0A1B0GU75 182 aa8.22□□□□□ -1.09
APP-213ENST00000464867 GOLGA6L10A6NI86 522 aa8.22□□□□□ -1.09
APP-213ENST00000464867 OR5H1A6NKK0 313 aa8.22□□□□□ -1.09
APP-213ENST00000464867 M0QZ24 198 aa8.22□□□□□ -1.09
APP-213ENST00000464867 ADAMDEC1O15204 470 aa8.22□□□□□ -1.09
APP-213ENST00000464867 KERAO60938 352 aa8.22□□□□□ -1.09
APP-213ENST00000464867 PRKD3O94806 890 aa8.22□□□□□ -1.09
APP-213ENST00000464867 YES1P07947 543 aa8.22□□□□□ -1.09
APP-213ENST00000464867 CPMP14384 443 aa8.22□□□□□ -1.09
APP-213ENST00000464867 DAOP14920 347 aa8.22□□□□□ -1.09
APP-213ENST00000464867 IFNGR1P15260 489 aa8.22□□□□□ -1.09
APP-213ENST00000464867 PORP16435 677 aaPredicted RBP8.22□□□□□ -1.09
APP-213ENST00000464867 FPR2P25090 351 aa8.22□□□□□ -1.09
APP-213ENST00000464867 GCH1P30793 250 aa8.22□□□□□ -1.09
APP-213ENST00000464867 EVI2BP34910 448 aa8.22□□□□□ -1.09
APP-213ENST00000464867 ARFIP1P53367 373 aa8.22□□□□□ -1.09
APP-213ENST00000464867 PNLIPRP2P54317 469 aa8.22□□□□□ -1.09
APP-213ENST00000464867 GAS1P54826 345 aa8.22□□□□□ -1.09
APP-213ENST00000464867 CARD18P57730 90 aa8.22□□□□□ -1.09
APP-213ENST00000464867 CHRNEQ04844 493 aa8.22□□□□□ -1.09
APP-213ENST00000464867 RASGEF1BQ0VAM2 473 aa8.22□□□□□ -1.09
APP-213ENST00000464867 STX5Q13190 355 aa8.22□□□□□ -1.09
APP-213ENST00000464867 DDX39BQ13838 428 aaKnown RBP8.22□□□□□ -1.09
APP-213ENST00000464867 EXOSC7Q15024 291 aaKnown RBP8.22□□□□□ -1.09
APP-213ENST00000464867 PDK4Q16654 411 aa8.22□□□□□ -1.09
APP-213ENST00000464867 RBM20Q5T481 1227 aaKnown RBP8.22□□□□□ -1.09
APP-213ENST00000464867 MED27Q6P2C8 311 aa8.22□□□□□ -1.09
APP-213ENST00000464867 HDXQ7Z353 690 aa8.22□□□□□ -1.09
APP-213ENST00000464867 PEX26Q7Z412 305 aa8.22□□□□□ -1.09
APP-213ENST00000464867 NUFIP2Q7Z417 695 aaKnown RBP8.22□□□□□ -1.09
APP-213ENST00000464867 ZDHHC22Q8N966 263 aa8.22□□□□□ -1.09
APP-213ENST00000464867 OR2V1Q8NHB1 315 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms