RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 A0A1W2PQD3 144 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 PRAMEF27A3QJZ7 478 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 B4DXG7 233 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 NPIPB9F8W1W9 429 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 SEMA7AO75326 666 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 TPOP07202 933 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 ETFAP13804 333 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 HOXB9P17482 250 aaPredicted RBP13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 DRD4P21917 467 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 DPP4P27487 766 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 ADSLP30566 484 aaPredicted RBP13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 SRD5A2P31213 254 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 CA7P43166 264 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 DSCR4P56555 118 aaPredicted RBP13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 SRSF1Q07955 248 aaKnown RBP eCLIP13.2□□□□□ -0.31e-6■■□□□ 13.1
SQSTM1-205ENST00000464493 FUT5Q11128 374 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 KLF10Q13118 480 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 SYPL1Q16563 259 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 WIPI1Q5MNZ9 446 aaPredicted RBP13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 AP1ARQ63HQ0 302 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 OLIG3Q7RTU3 272 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 SPATA21Q7Z572 469 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 YRDCQ86U90 279 aaKnown RBP13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 DOLPP1Q86YN1 238 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 GATSQ8NAP1 163 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 OR14L1PQ8NHC6 308 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 FAM57AQ8TBR7 257 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 RELTQ969Z4 430 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 SARAFQ96BY9 339 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 TRNT1Q96Q11 434 aaKnown RBP13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 OR2B2Q9GZK3 357 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 RAD21L1Q9H4I0 556 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 PTGES2Q9H7Z7 377 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 POLE3Q9NRF9 147 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 TAS2R10Q9NYW0 307 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 SLC25A37Q9NYZ2 338 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 VAPAQ9P0L0 249 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 SPRR3Q9UBC9 169 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 SH3BGRL2Q9UJC5 107 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 ERRFI1Q9UJM3 462 aaPredicted RBP13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 TINAGQ9UJW2 476 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 ACAD8Q9UKU7 415 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 WDR45Q9Y484 360 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 DTNAQ9Y4J8 743 aa13.2□□□□□ -0.3
SQSTM1-205ENST00000464493 C15orf38-AP3S2A0A0A6YYH1 394 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 CLEC18AA5D8T8 446 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 H3BNH8 94 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 BCKDKO14874 412 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 AGFG2O95081 481 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 ZIC2O95409 532 aaPredicted RBP13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 H6PDO95479 791 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 NR2F1P10589 423 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 ENDOUP21128 410 aaKnown RBP13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 PPIBP23284 216 aaKnown RBP13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 MSX1P28360 303 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 DSTNP60981 165 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 HPCAP84074 193 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 FADDQ13158 208 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 RGNQ15493 299 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 CD226Q15762 336 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 ZNF141Q15928 474 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 GXYLT1Q4G148 440 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 TYW3Q6IPR3 259 aaKnown RBP13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 CLEC18BQ6UXF7 455 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 DLEU7Q6UYE1 221 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 MTERF4Q7Z6M4 381 aaKnown RBP13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 CD163Q86VB7 1156 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 FJX1Q86VR8 437 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 MSRB3Q8IXL7 192 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 DPP10Q8N608 796 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 ZNF614Q8N883 585 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 ANKFN1Q8N957 763 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 CLEC18CQ8NCF0 446 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 PHOSPHO1Q8TCT1 267 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 SAP130Q9H0E3 1048 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 THUMPD1Q9NXG2 353 aaKnown RBP13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 FAM53CQ9NYF3 392 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 P2RX2Q9UBL9 471 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 TNFRSF10DQ9UBN6 386 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 DKKL1Q9UK85 242 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 SLC6A5Q9Y345 797 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 MYO7BQ6PIF6 2116 aa13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 USP9XQ93008 2570 aaPredicted RBP13.19□□□□□ -0.3
SQSTM1-205ENST00000464493 TRBV5-3A0A0A0MS03 114 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 CCL21O00585 134 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 SLC22A2O15244 555 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 GMFGO60234 142 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 KIAA0513O60268 411 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 ZIC3O60481 467 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 SNX3O60493 162 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 CCDC22O60826 627 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 UGT2B17O75795 530 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 ESRRAP11474 423 aaPredicted RBP13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 GCKP35557 465 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 RNF144AP50876 292 aaPredicted RBP13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 CHRNEQ04844 493 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 GANABQ14697 944 aaKnown RBP13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 MAPRE2Q15555 327 aa13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 ZNF630Q2M218 657 aaPredicted RBP13.18□□□□□ -0.3
SQSTM1-205ENST00000464493 NHSL2Q5HYW2 709 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms