RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 ATP10AO60312 1499 aa3.33□□□□□ -1.88
ITGB1-208ENST00000464001 TRAV6A0A075B6T7 132 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 LOC105371242A0A075B767 164 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 A0A1B0GVL5 298 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 A0A1W2PR80 420 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 KLLNB2CW77 178 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 WWP2O00308 870 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 LSM1O15116 133 aaKnown RBP3.32□□□□□ -1.88
ITGB1-208ENST00000464001 TIMM8AO60220 97 aaPredicted RBP3.32□□□□□ -1.88
ITGB1-208ENST00000464001 TXNDC12O95881 172 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 MBP02144 154 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 SERPINF2P08697 491 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 ANXA4P09525 319 aaPredicted RBP3.32□□□□□ -1.88
ITGB1-208ENST00000464001 UMPSP11172 480 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 MSR1P21757 451 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 LCN1P31025 176 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 ALDH3B1P43353 468 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 NAMPTP43490 491 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 GPR4P46093 362 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 MAP3K7CLP57077 242 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 TPM4P67936 248 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 IRF8Q02556 426 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 CCDC173Q0VFZ6 552 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 MERTKQ12866 999 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 NME3Q13232 169 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 SLAQ13239 276 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 ILKQ13418 452 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 TMEM132DQ14C87 1099 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 HEPACAMQ14CZ8 416 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 EXT1Q16394 746 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 SYPL1Q16563 259 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 FAM83EQ2M2I3 478 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 HSP90AA4PQ58FG1 418 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 XKR7Q5GH72 579 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 RAET1LQ5VY80 246 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 PLCXD3Q63HM9 321 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 TMEM53Q6P2H8 277 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 RNASEKQ6P5S7 137 aaKnown RBP3.32□□□□□ -1.88
ITGB1-208ENST00000464001 TTC23LQ6PF05 361 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 KCNIP4Q6PIL6 250 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 C5orf24Q7Z6I8 188 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 LGI2Q8N0V4 545 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 OR4K14Q8NGD5 310 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 OR1L4Q8NGR5 311 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 OR13F1Q8NGS4 319 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 GLYATL2Q8WU03 294 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 SCFD1Q8WVM8 642 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 ST8SIA1Q92185 356 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 PINX1Q96BK5 328 aaKnown RBP3.32□□□□□ -1.88
ITGB1-208ENST00000464001 TECTBQ96PL2 329 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 WRAP53Q9BUR4 548 aaKnown RBP3.32□□□□□ -1.88
ITGB1-208ENST00000464001 SPATA16Q9BXB7 569 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 RHOJQ9H4E5 214 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 DHX33Q9H6R0 707 aaKnown RBP3.32□□□□□ -1.88
ITGB1-208ENST00000464001 CHRAC1Q9NRG0 131 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 GKN1Q9NS71 199 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 NUDT15Q9NV35 164 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 SMOXQ9NWM0 555 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 PIPOXQ9P0Z9 390 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 C19orf25Q9UFG5 118 aaPredicted RBP3.32□□□□□ -1.88
ITGB1-208ENST00000464001 ZNF639Q9UID6 485 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 PILRAQ9UKJ1 303 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 EMCNQ9ULC0 261 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 VANGL2Q9ULK5 521 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 BARX2Q9UMQ3 279 aaPredicted RBP3.32□□□□□ -1.88
ITGB1-208ENST00000464001 STUB1Q9UNE7 303 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 NCKAP1Q9Y2A7 1128 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 KLHDC2Q9Y2U9 406 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 SH3TC1Q8TE82 1336 aa3.32□□□□□ -1.88
ITGB1-208ENST00000464001 CARMIL1Q5VZK9 1371 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 SALL1Q9NSC2 1324 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.31□□□□□ -1.88
ITGB1-208ENST00000464001 ATP6AP2A0A1C7CYW4 349 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 SH3PXD2BA1X283 911 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 IQCF5A8MTL0 148 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 E9PMD0 336 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 SGK494L7N484 410 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 EIF3HO15372 352 aaKnown RBP eCLIP3.31□□□□□ -1.88
ITGB1-208ENST00000464001 NBR2O15453 112 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 DUX1O43812 170 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 NIPSNAP2O75323 286 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 GRAP2O75791 330 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 APRTP07741 180 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 IGFBP1P08833 259 aaPredicted RBP3.31□□□□□ -1.88
ITGB1-208ENST00000464001 HIST1H2AGP0C0S8 130 aaPredicted RBP3.31□□□□□ -1.88
ITGB1-208ENST00000464001 DBTP11182 482 aaKnown RBP3.31□□□□□ -1.88
ITGB1-208ENST00000464001 GP9P14770 177 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 LAP3P28838 519 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 HNRNPH3P31942 346 aaKnown RBP3.31□□□□□ -1.88
ITGB1-208ENST00000464001 CSTF2P33240 577 aaKnown RBP eCLIP3.31□□□□□ -1.88
ITGB1-208ENST00000464001 ACADSBP45954 432 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 NPY2RP49146 381 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 CCR4P51679 360 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 VAMP7P51809 220 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 NDST2P52849 883 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 CDH4P55283 916 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 MYL6P60660 151 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 NAAAQ02083 359 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 GABPAQ06546 454 aa3.31□□□□□ -1.88
ITGB1-208ENST00000464001 TAF10Q12962 218 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms