RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 MCOLN1Q9GZU1 580 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 KLHL31Q9H511 634 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 FLVCR2Q9UPI3 526 aa11.62□□□□□ -0.55
HDAC4-208ENST00000463007 MRPS23Q9Y3D9 190 aaKnown RBP11.62□□□□□ -0.55
HDAC4-208ENST00000463007 SNTNA6NMZ2 147 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 PSMD9O00233 223 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 OR7A10O76100 309 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 EPPINO95925 133 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 DHFRP00374 187 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 PDGFAP04085 211 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 TRAPPC2P0DI81 140 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 TRAPPC2BP0DI82 140 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 CLUP10909 449 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 PTHLHP12272 177 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 RGS8P57771 180 aaPredicted RBP11.61□□□□□ -0.55
HDAC4-208ENST00000463007 TEKQ02763 1124 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 RAB40BQ12829 278 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 ZNF234Q14588 700 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 PLEKHM3Q6ZWE6 761 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 KANSL1Q7Z3B3 1105 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 LUZP2Q86TE4 346 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 MARVELD1Q9BSK0 173 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 RBCK1Q9BYM8 510 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 OR6C2Q9NZP2 312 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 RWDD3Q9Y3V2 267 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 NPIPA5A0A0B4J1W7 369 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 NPIPA7E9PJI5 369 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 RFPL3O75679 317 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 UBXN7O94888 489 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 NPIPA8P0DM63 369 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 SNRPBP14678 240 aaKnown RBP11.61□□□□□ -0.55
HDAC4-208ENST00000463007 GCGRP47871 477 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 ATP12AP54707 1039 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 SMIM11AP58511 58 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 TPBGQ13641 420 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 C3orf38Q5JPI3 329 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 TMEM201Q5SNT2 666 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 CCNJQ5T5M9 372 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 CREB3L2Q70SY1 520 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 CEACAM19Q7Z692 300 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 OR4N5Q8IXE1 308 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 TMEM99Q8N816 258 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 OR4D9Q8NGE8 314 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 GSDMCQ9BYG8 508 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 C6orf106Q9H6K1 298 aaPredicted RBP11.61□□□□□ -0.55
HDAC4-208ENST00000463007 HINT3Q9NQE9 182 aaKnown RBP11.61□□□□□ -0.55
HDAC4-208ENST00000463007 NLGN3Q9NZ94 848 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 SLC22A5O76082 557 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 GKN3PP0CG01 181 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 STOMP27105 288 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 ID2Q02363 134 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 OC90Q02509 493 aaPredicted RBP11.61□□□□□ -0.55
HDAC4-208ENST00000463007 SUZ12Q15022 739 aaKnown RBP11.61□□□□□ -0.55
HDAC4-208ENST00000463007 LTB4RQ15722 352 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 ZBTB37Q5TC79 503 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 C18orf63Q68DL7 685 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 FAAP20Q6NZ36 180 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 ADAMTSL4Q6UY14 1074 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 COMMD7Q86VX2 200 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 PLA2G15Q8NCC3 412 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 RELTQ969Z4 430 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 RAD51AP1Q96B01 352 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 ZNF514Q96K75 400 aaPredicted RBP11.61□□□□□ -0.55
HDAC4-208ENST00000463007 HCAR1Q9BXC0 346 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 CACNG6Q9BXT2 260 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 HDAC8Q9BY41 377 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 DPH1Q9BZG8 443 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 ZCCHC2Q9C0B9 1178 aaKnown RBP11.61□□□□□ -0.55
HDAC4-208ENST00000463007 ENKD1Q9H0I2 346 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 TRPV4Q9HBA0 871 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 SLC23A2Q9UGH3 650 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 FBXL4Q9UKA2 621 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 PCDHGB7Q9Y5F8 929 aa11.61□□□□□ -0.55
HDAC4-208ENST00000463007 DAPL1A0PJW8 107 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 ERI3O43414 337 aaKnown RBP11.6□□□□□ -0.55
HDAC4-208ENST00000463007 VEGFDO43915 354 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 CFDP00746 253 aaPredicted RBP11.6□□□□□ -0.55
HDAC4-208ENST00000463007 PTGS2P35354 604 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 DGCR2P98153 550 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 E2F1Q01094 437 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 DUSP2Q05923 314 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 TNK1Q13470 666 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 DSG2Q14126 1118 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 ZNF767PQ75MW2 155 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 TOMM5Q8N4H5 51 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 OR2T35Q8NGX2 323 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 OR8D1Q8WZ84 308 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 CLEC4MQ9H2X3 399 aaPredicted RBP11.6□□□□□ -0.55
HDAC4-208ENST00000463007 NIPAL2Q9H841 368 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 NANSQ9NR45 359 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 TMEM5Q9Y2B1 443 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 SEC16AO15027 2179 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 A8MVJ9 347 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 PROM1O43490 865 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 PI15O43692 258 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 SLC43A1O75387 559 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 RGS11O94810 467 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 LGI1O95970 557 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 P2RY2P41231 377 aa11.6□□□□□ -0.55
HDAC4-208ENST00000463007 MC3RP41968 323 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms