RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 ARPINQ7Z6K5 226 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 ANKRD46Q86W74 232 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 TICAM1Q8IUC6 712 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 C10orf67Q8IYJ2 551 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 KIAA2013Q8IYS2 634 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 MMP21Q8N119 569 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 CSNK1A1LQ8N752 337 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 RNF148Q8N7C7 305 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 FAM47BQ8NA70 645 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 ZCCHC10Q8TBK6 192 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 WDR60Q8WVS4 1066 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 CCDC124Q96CT7 223 aaKnown RBP6.84□□□□□ -1.31
UBE4B-204ENST00000462658 SMIM10Q96HG1 83 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 HS6ST2Q96MM7 605 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 CCDC115Q96NT0 180 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 GBP5Q96PP8 586 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 SERINC2Q96SA4 455 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 INPP5KQ9BT40 448 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 FAIM2Q9BWQ8 316 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 PAIP1Q9H074 479 aaKnown RBP6.84□□□□□ -1.31
UBE4B-204ENST00000462658 PDE7BQ9NP56 450 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 MIEF1Q9NQG6 463 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 STARD5Q9NSY2 213 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 SOHLH2Q9NX45 425 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 LYARQ9NX58 379 aaKnown RBP6.84□□□□□ -1.31
UBE4B-204ENST00000462658 VAPAQ9P0L0 249 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 ABCD2Q9UBJ2 740 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 CD300AQ9UGN4 299 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 BTNL2Q9UIR0 455 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 PRDM4Q9UKN5 801 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 FBXW2Q9UKT8 454 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 PLCL2Q9UPR0 1127 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 POMPQ9Y244 141 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 ASB4Q9Y574 426 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 U3KQA8 63 aa6.84□□□□□ -1.31
UBE4B-204ENST00000462658 HEATR5BQ9P2D3 2071 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 A0A1W2PRB8 838 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 NME4O00746 187 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 NVLO15381 856 aaKnown RBP6.83□□□□□ -1.32
UBE4B-204ENST00000462658 ENTPD5O75356 428 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 SCELO95171 688 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 EFNA1P20827 205 aaPredicted RBP6.83□□□□□ -1.32
UBE4B-204ENST00000462658 CDKN2CP42773 168 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 GABRA4P48169 554 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 DUSP3P51452 185 aaPredicted RBP6.83□□□□□ -1.32
UBE4B-204ENST00000462658 MS4A2Q01362 244 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 CFHR3Q02985 330 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 LIPEQ05469 1076 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 RIPK1Q13546 671 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 MFSD13AQ14CX5 517 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 PRTGQ2VWP7 1150 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 GTDC1Q4AE62 458 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 DEFB134Q4QY38 66 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 NDUFAF5Q5TEU4 345 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 TCEAL6Q6IPX3 200 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 TMEM71Q6P5X7 295 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 TMEM65Q6PI78 240 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 DCDC5Q6ZRR9 648 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 ZNF621Q6ZSS3 439 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 MSRB3Q8IXL7 192 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 CLECL1Q8IZS7 167 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 NATD1Q8N6N6 113 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 OR8J3Q8NGG0 315 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 OR4A15Q8NGL6 344 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 OR1N1Q8NGS0 311 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 NTN5Q8WTR8 489 aaPredicted RBP6.83□□□□□ -1.32
UBE4B-204ENST00000462658 DPF1Q92782 380 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 N4BP2L2Q92802 583 aaPredicted RBP6.83□□□□□ -1.32
UBE4B-204ENST00000462658 NAT6Q93015 286 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 UCN3Q969E3 161 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 TCEAL3Q969E4 200 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 CIDECQ96AQ7 238 aaPredicted RBP6.83□□□□□ -1.32
UBE4B-204ENST00000462658 ZNF764Q96H86 408 aaPredicted RBP6.83□□□□□ -1.32
UBE4B-204ENST00000462658 ANKRD27Q96NW4 1050 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 PANX1Q96RD7 426 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 SH3GL1Q99961 368 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 MAPKAP1Q9BPZ7 522 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 NUDT22Q9BRQ3 303 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 THUMPD3Q9BV44 507 aaKnown RBP6.83□□□□□ -1.32
UBE4B-204ENST00000462658 CHRNA10Q9GZZ6 450 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 SLC6A13Q9NSD5 602 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 TEX10Q9NXF1 929 aaPredicted RBP6.83□□□□□ -1.32
UBE4B-204ENST00000462658 SLC25A37Q9NYZ2 338 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 TMEM9Q9P0T7 183 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 LRFN1Q9P244 771 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 SEMA5BQ9P283 1151 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 BCAP29Q9UHQ4 241 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 PCDHGB4Q9UN71 923 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 MRPS2Q9Y399 296 aaKnown RBP6.83□□□□□ -1.32
UBE4B-204ENST00000462658 ATG4BQ9Y4P1 393 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 SLC22A7Q9Y694 548 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 PI4KAP42356 2102 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 CACNA1EQ15878 2313 aa6.83□□□□□ -1.32
UBE4B-204ENST00000462658 MN1Q10571 1320 aaPredicted RBP6.82□□□□□ -1.32
UBE4B-204ENST00000462658 ADAMTS9Q9P2N4 1935 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 TRBV5-3A0A0A0MS03 114 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 C1orf226A1L170 272 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 WASHC1A8K0Z3 465 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 A8MU76 341 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 CLIC1O00299 241 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms