RNA–Protein interactions for RNA: ENST00000461871.1

GTF3C5-208, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 623 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-208ENST00000461871 PARP8Q8N3A8 854 aa13.02□□□□□ -0.33
GTF3C5-208ENST00000461871 CLIP4Q8N3C7 705 aa13.02□□□□□ -0.33
GTF3C5-208ENST00000461871 LSMEM1Q8N8F7 131 aa13.02□□□□□ -0.33
GTF3C5-208ENST00000461871 GALNT6Q8NCL4 622 aa13.02□□□□□ -0.33
GTF3C5-208ENST00000461871 ZNF555Q8NEP9 628 aa13.02□□□□□ -0.33
GTF3C5-208ENST00000461871 SLC38A4Q969I6 547 aa13.02□□□□□ -0.33
GTF3C5-208ENST00000461871 IP6K3Q96PC2 410 aa13.02□□□□□ -0.33
GTF3C5-208ENST00000461871 FUZQ9BT04 418 aa13.02□□□□□ -0.33
GTF3C5-208ENST00000461871 NXF5Q9H1B4 397 aaKnown RBP13.02□□□□□ -0.33
GTF3C5-208ENST00000461871 EXOSC3Q9NQT5 275 aaKnown RBP13.02□□□□□ -0.33
GTF3C5-208ENST00000461871 VNN3Q9NY84 501 aa13.02□□□□□ -0.33
GTF3C5-208ENST00000461871 PISDQ9UG56 409 aa13.02□□□□□ -0.33
GTF3C5-208ENST00000461871 DTX4Q9Y2E6 619 aa13.02□□□□□ -0.33
GTF3C5-208ENST00000461871 TESMINQ9Y4I5 508 aa13.02□□□□□ -0.33
GTF3C5-208ENST00000461871 U3KQV3 271 aa13.02□□□□□ -0.33
GTF3C5-208ENST00000461871 KNTC1P50748 2209 aa13.02□□□□□ -0.33
GTF3C5-208ENST00000461871 SERINC4A6NH21 518 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 OR6C70A6NIJ9 312 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 CDK2AP1O14519 115 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 TM4SF5O14894 197 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 GDF9O60383 454 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 TSPAN2O60636 221 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 CYP7B1O75881 506 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 DIRAS1O95057 198 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 ADAP00813 363 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 IGKV1D-16P01601 117 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 ITGAMP11215 1152 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 ITIH1P19827 911 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 TNFRSF1BP20333 461 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 MYF6P23409 242 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 IGFBP5P24593 272 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 TMED10P49755 219 aaKnown RBP13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 IST1P53990 364 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 CDH12P55289 794 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 RPS15P62841 145 aaKnown RBP13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 MAPK14Q16539 360 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 MRPL2Q5T653 305 aaKnown RBP13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 PLAG1Q6DJT9 500 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 DEF8Q6ZN54 512 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 ZNF836Q6ZNA1 936 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 LANCL3Q6ZV70 420 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 USP51Q70EK9 711 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 MISPQ8IVT2 679 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 ARMC10Q8N2F6 343 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 GALNT15Q8N3T1 639 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 ATG16L2Q8NAA4 619 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 OR10G2Q8NGC3 310 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 OR4D11Q8NGI4 311 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 DOK4Q8TEW6 326 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 TTC9Q92623 222 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 GATA6Q92908 595 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 MPP4Q96JB8 637 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 IMMP1LQ96LU5 166 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 HS6ST2Q96MM7 605 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 MCHR1Q99705 422 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 DGCR6LQ9BY27 220 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 QRSL1Q9H0R6 528 aaKnown RBP13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 FBXO34Q9NWN3 711 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 FAM118AQ9NWS6 357 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 TMEFF2Q9UIK5 374 aaPredicted RBP13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 KCNE5Q9UJ90 142 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 FARSAQ9Y285 508 aaKnown RBP13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 POFUT2Q9Y2G5 429 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 PTRH2Q9Y3E5 179 aaKnown RBP13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 TPRP12270 2363 aaKnown RBP13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 CHD6Q8TD26 2715 aa13.01□□□□□ -0.33
GTF3C5-208ENST00000461871 SH3PXD2BA1X283 911 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 TRAPPC13A5PLN9 417 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 MAGEA13PA6NCF6 341 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 C9orf172C9J069 976 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 EIF4E2O60573 245 aaKnown RBP13□□□□□ -0.33
GTF3C5-208ENST00000461871 SEMA7AO75326 666 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 NME6O75414 186 aaPredicted RBP13□□□□□ -0.33
GTF3C5-208ENST00000461871 UMODP07911 640 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 FTH1P19P0C7X4 201 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 HPGDP15428 266 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 GSTM3P21266 225 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 DAPP51397 102 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 ZNF136P52737 540 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 TAS2R41P59536 307 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 ESRRGP62508 458 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 KEAP1Q14145 624 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 PDK3Q15120 406 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 PDZK1Q5T2W1 519 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 ZNF770Q6IQ21 691 aaPredicted RBP13□□□□□ -0.33
GTF3C5-208ENST00000461871 NDUFAF7Q7L592 441 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 NUP54Q7Z3B4 507 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 CHERPQ8IWX8 916 aaKnown RBP13□□□□□ -0.33
GTF3C5-208ENST00000461871 FAM71CQ8NEG0 241 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 OR4N2Q8NGD1 307 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 ELP5Q8TE02 316 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 ZNF570Q96NI8 536 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 FEVQ99581 238 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 AKIRIN1Q9H9L7 192 aaPredicted RBP13□□□□□ -0.33
GTF3C5-208ENST00000461871 SMURF2Q9HAU4 748 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 TMEM27Q9HBJ8 222 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 MMP25Q9NPA2 562 aa13□□□□□ -0.33
GTF3C5-208ENST00000461871 KRCC1Q9NPI7 259 aaPredicted RBP13□□□□□ -0.33
GTF3C5-208ENST00000461871 KRT84Q9NSB2 600 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms