RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 RNF103-CHMP3A0A140T963 221 aa20.38■□□□□ 0.85
TRAF4-207ENST00000461195 CD8B2A6NJW9 211 aa20.38■□□□□ 0.85
TRAF4-207ENST00000461195 KDM4EB2RXH2 506 aaPredicted RBP20.38■□□□□ 0.85
TRAF4-207ENST00000461195 H0Y3Z8 333 aa20.38■□□□□ 0.85
TRAF4-207ENST00000461195 SCDO00767 359 aa20.38■□□□□ 0.85
TRAF4-207ENST00000461195 CEACAM8P31997 349 aaPredicted RBP20.38■□□□□ 0.85
TRAF4-207ENST00000461195 S100A3P33764 101 aa20.38■□□□□ 0.85
TRAF4-207ENST00000461195 STARP49675 285 aa20.38■□□□□ 0.85
TRAF4-207ENST00000461195 LHX2P50458 406 aa20.38■□□□□ 0.85
TRAF4-207ENST00000461195 B3GALT5-AS1P59052 145 aa20.38■□□□□ 0.85
TRAF4-207ENST00000461195 UFM1P61960 85 aa20.38■□□□□ 0.85
TRAF4-207ENST00000461195 SRYQ05066 204 aa20.38■□□□□ 0.85
TRAF4-207ENST00000461195 FAM174BQ3ZCQ3 159 aa20.38■□□□□ 0.85
TRAF4-207ENST00000461195 DCST2Q5T1A1 773 aa20.38■□□□□ 0.85
TRAF4-207ENST00000461195 C6orf120Q7Z4R8 191 aa20.38■□□□□ 0.85
TRAF4-207ENST00000461195 OR7D2Q96RA2 312 aa20.38■□□□□ 0.85
TRAF4-207ENST00000461195 GPR45Q9Y5Y3 372 aa20.38■□□□□ 0.85
TRAF4-207ENST00000461195 CPSF4O95639 269 aaKnown RBP20.37■□□□□ 0.85
TRAF4-207ENST00000461195 IL2RAP01589 272 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 MATN1P21941 496 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 TFF3Q07654 80 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 SLC25A35Q3KQZ1 300 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 SLC9B1Q4ZJI4 515 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 RAET1LQ5VY80 246 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 LIX1LQ8IVB5 337 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 MISPQ8IVT2 679 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 MCEMP1Q8IX19 187 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 CLEC4FQ8N1N0 589 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 GATSQ8NAP1 163 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 TNIP2Q8NFZ5 429 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 OR5D16Q8NGK9 328 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 LRRC8CQ8TDW0 803 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 ACTRT2Q8TDY3 377 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 SLC35G5Q96KT7 338 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 TEX37Q96LM6 180 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 ZBTB18Q99592 522 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 SPOCK3Q9BQ16 436 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 TUBA1CQ9BQE3 449 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 ENKD1Q9H0I2 346 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 KCNE3Q9Y6H6 103 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 KIAA1549Q9HCM3 1950 aa20.37■□□□□ 0.85
TRAF4-207ENST00000461195 CSMD1Q96PZ7 3565 aa20.36■□□□□ 0.85
TRAF4-207ENST00000461195 ADGRG4Q8IZF6 3080 aa20.36■□□□□ 0.85
TRAF4-207ENST00000461195 A0A1W2PQD3 144 aa20.36■□□□□ 0.85
TRAF4-207ENST00000461195 MBD3L4A6NDZ8 208 aaPredicted RBP20.36■□□□□ 0.85
TRAF4-207ENST00000461195 MBD3L3A6NE82 208 aaPredicted RBP20.36■□□□□ 0.85
TRAF4-207ENST00000461195 MBD3L5A6NJ08 208 aaPredicted RBP20.36■□□□□ 0.85
TRAF4-207ENST00000461195 DUXAA6NLW8 204 aa20.36■□□□□ 0.85
TRAF4-207ENST00000461195 HMGB1P1B2RPK0 211 aaPredicted RBP20.36■□□□□ 0.85
TRAF4-207ENST00000461195 IDO1P14902 403 aa20.36■□□□□ 0.85
TRAF4-207ENST00000461195 ZNF708P17019 499 aa20.36■□□□□ 0.85
TRAF4-207ENST00000461195 UQCRC2P22695 453 aa20.36■□□□□ 0.85
TRAF4-207ENST00000461195 MSX1P28360 303 aa20.36■□□□□ 0.85
TRAF4-207ENST00000461195 CLDN18P56856 261 aa20.36■□□□□ 0.85
TRAF4-207ENST00000461195 RPS26P62854 115 aaKnown RBP20.36■□□□□ 0.85
TRAF4-207ENST00000461195 BCL2A1Q16548 175 aa20.36■□□□□ 0.85
TRAF4-207ENST00000461195 GLYR1Q49A26 553 aaPredicted RBP20.36■□□□□ 0.85
TRAF4-207ENST00000461195 MAVSQ7Z434 540 aa20.36■□□□□ 0.85
TRAF4-207ENST00000461195 ZNF527Q8NB42 609 aa20.36■□□□□ 0.85
TRAF4-207ENST00000461195 ACBD4Q8NC06 268 aa20.36■□□□□ 0.85
TRAF4-207ENST00000461195 GOT1L1Q8NHS2 421 aaPredicted RBP20.36■□□□□ 0.85
TRAF4-207ENST00000461195 MBD3L2Q8NHZ7 208 aaPredicted RBP20.36■□□□□ 0.85
TRAF4-207ENST00000461195 C7orf26Q96N11 449 aa20.36■□□□□ 0.85
TRAF4-207ENST00000461195 PIGQQ9BRB3 760 aa20.36■□□□□ 0.85
TRAF4-207ENST00000461195 HOXD1Q9GZZ0 328 aa20.36■□□□□ 0.85
TRAF4-207ENST00000461195 BTNL2Q9UIR0 455 aa20.36■□□□□ 0.85
TRAF4-207ENST00000461195 LINC01387J3KSC0 135 aa20.35■□□□□ 0.85
TRAF4-207ENST00000461195 ZNF195O14628 629 aa20.35■□□□□ 0.85
TRAF4-207ENST00000461195 GMFGO60234 142 aa20.35■□□□□ 0.85
TRAF4-207ENST00000461195 PEPDP12955 493 aa20.35■□□□□ 0.85
TRAF4-207ENST00000461195 PRF1P14222 555 aa20.35■□□□□ 0.85
TRAF4-207ENST00000461195 IL12AP29459 219 aa20.35■□□□□ 0.85
TRAF4-207ENST00000461195 MEX3BQ6ZN04 569 aaKnown RBP20.35■□□□□ 0.85
TRAF4-207ENST00000461195 GLB1L3Q8NCI6 653 aaPredicted RBP20.35■□□□□ 0.85
TRAF4-207ENST00000461195 NAXEQ8NCW5 288 aa20.35■□□□□ 0.85
TRAF4-207ENST00000461195 DYDC1Q8WWB3 177 aa20.35■□□□□ 0.85
TRAF4-207ENST00000461195 CCDC115Q96NT0 180 aa20.35■□□□□ 0.85
TRAF4-207ENST00000461195 SERHL2Q9H4I8 314 aa20.35■□□□□ 0.85
TRAF4-207ENST00000461195 NPDC1Q9NQX5 325 aaPredicted RBP20.35■□□□□ 0.85
TRAF4-207ENST00000461195 USH1CQ9Y6N9 552 aa20.35■□□□□ 0.85
TRAF4-207ENST00000461195 PKDREJQ9NTG1 2253 aa20.35■□□□□ 0.85
TRAF4-207ENST00000461195 OR2M5A3KFT3 312 aa20.34■□□□□ 0.85
TRAF4-207ENST00000461195 C9JVG2 144 aa20.34■□□□□ 0.85
TRAF4-207ENST00000461195 DVL2O14641 736 aa20.34■□□□□ 0.85
TRAF4-207ENST00000461195 AK1P00568 194 aa20.34■□□□□ 0.85
TRAF4-207ENST00000461195 PGRP06401 933 aa20.34■□□□□ 0.85
TRAF4-207ENST00000461195 POU3F2P20265 443 aaPredicted RBP20.34■□□□□ 0.85
TRAF4-207ENST00000461195 DGKQP52824 942 aa20.34■□□□□ 0.85
TRAF4-207ENST00000461195 GSTA3Q16772 222 aa20.34■□□□□ 0.85
TRAF4-207ENST00000461195 FLYWCH1Q4VC44 716 aa20.34■□□□□ 0.85
TRAF4-207ENST00000461195 PDCD4Q53EL6 469 aaKnown RBP20.34■□□□□ 0.85
TRAF4-207ENST00000461195 ADGRE4PQ86SQ3 457 aa20.34■□□□□ 0.85
TRAF4-207ENST00000461195 MIPOL1Q8TD10 442 aa20.34■□□□□ 0.85
TRAF4-207ENST00000461195 DOCK7Q96N67 2140 aa20.34■□□□□ 0.85
TRAF4-207ENST00000461195 OR52B2Q96RD2 323 aa20.34■□□□□ 0.85
TRAF4-207ENST00000461195 OR52E6Q96RD3 313 aa20.34■□□□□ 0.85
TRAF4-207ENST00000461195 UCN2Q96RP3 112 aa20.34■□□□□ 0.85
TRAF4-207ENST00000461195 ZNF629Q9UEG4 869 aaPredicted RBP20.34■□□□□ 0.85
TRAF4-207ENST00000461195 ZNF337Q9Y3M9 751 aa20.34■□□□□ 0.85
TRAF4-207ENST00000461195 A0A087WZY1 265 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms