RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 RGNQ15493 299 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 ST3GAL2Q16842 350 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 PRSS53Q2L4Q9 553 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 ZNF630Q2M218 657 aaPredicted RBP5.47□□□□□ -1.53
NUP98-208ENST00000461047 DNAL1Q4LDG9 190 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 GPAT3Q53EU6 434 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 RUNDC3AQ59EK9 446 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 PAGE3Q5JUK9 113 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 SAMD4BQ5PRF9 694 aaKnown RBP5.47□□□□□ -1.53
NUP98-208ENST00000461047 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.47□□□□□ -1.53
NUP98-208ENST00000461047 GCNT6Q5T4J0 391 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 ATP1A1-AS1Q5TC04 95 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 PRAMEF8Q5VWM4 474 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 PRAMEF7Q5VXH5 474 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 SLC22A10Q63ZE4 541 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 NANOGP8Q6NSW7 305 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 POMZP3Q6PJE2 187 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 DGAT2L6Q6ZPD8 337 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 LINC00696Q6ZRV3 163 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 SERPINA11Q86U17 422 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 C9orf40Q8IXQ3 194 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 CYP4Z2PQ8N1L4 340 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 KIF2BQ8N4N8 673 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 LINC01356Q8N9X3 169 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 TMEM178AQ8NBL3 297 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 SLC16A11Q8NCK7 471 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 C11orf65Q8NCR3 313 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 C9orf43Q8TAL5 461 aaPredicted RBP5.47□□□□□ -1.53
NUP98-208ENST00000461047 SPPL2AQ8TCT8 520 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 SLC26A7Q8TE54 656 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 DOK4Q8TEW6 326 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 DIO2Q92813 273 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 HAS2Q92819 552 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 POP5Q969H6 163 aaKnown RBP5.47□□□□□ -1.53
NUP98-208ENST00000461047 ADIPOR1Q96A54 375 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 VSTM2LQ96N03 204 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 COL21A1Q96P44 957 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 TRNT1Q96Q11 434 aaKnown RBP5.47□□□□□ -1.53
NUP98-208ENST00000461047 OR7D2Q96RA2 312 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 ZNF607Q96SK3 696 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 SECISBP2Q96T21 854 aaKnown RBP5.47□□□□□ -1.53
NUP98-208ENST00000461047 YIPF4Q9BSR8 244 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 ITPAQ9BY32 194 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 KRTAP4-9Q9BYQ8 210 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 NXF5Q9H1B4 397 aaKnown RBP5.47□□□□□ -1.53
NUP98-208ENST00000461047 OR51I1Q9H343 314 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 MTHFD2LQ9H903 347 aaPredicted RBP5.47□□□□□ -1.53
NUP98-208ENST00000461047 NANOGQ9H9S0 305 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 SPAG4Q9NPE6 437 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 SLAMF7Q9NQ25 335 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 UBQLN4Q9NRR5 601 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 ADA2Q9NZK5 511 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 LRFN1Q9P244 771 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 P2RX2Q9UBL9 471 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 CGGBP1Q9UFW8 167 aaPredicted RBP5.47□□□□□ -1.53
NUP98-208ENST00000461047 SLC13A4Q9UKG4 626 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 GMEB1Q9Y692 573 aa5.47□□□□□ -1.53
NUP98-208ENST00000461047 MDC1Q14676 2089 aaKnown RBP5.47□□□□□ -1.53
NUP98-208ENST00000461047 ADAMTS20P59510 1910 aa5.46□□□□□ -1.53
NUP98-208ENST00000461047 TRAV17A0A0B4J275 112 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 A0A0G2JPF8 293 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 ANKRD34BA5PLL1 514 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 PRORSD1PA6NEY8 169 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 OR6C70A6NIJ9 312 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 KRTAP9-7A8MTY7 169 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 HNRNPCL2B2RXH8 293 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 HNRNPCL3B7ZW38 293 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 FBP2O00757 339 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 SLC28A2O43868 658 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 SNRNP200O75643 2136 aaKnown RBP5.46□□□□□ -1.54
NUP98-208ENST00000461047 SNX4O95219 450 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 PSMG1O95456 288 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 IL33O95760 270 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 GUSBP08236 651 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 HNRNPCL4P0DMR1 293 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 CT45A8P0DMV1 189 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 CT45A9P0DMV2 189 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 UQCRBP14927 111 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 ABCD3P28288 659 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 PTGER1P34995 402 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 CDKN2CP42773 168 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 ZFP36L2P47974 494 aaKnown RBP5.46□□□□□ -1.54
NUP98-208ENST00000461047 RFX3P48380 749 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 EFNA3P52797 238 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 EEFSECP57772 596 aaKnown RBP5.46□□□□□ -1.54
NUP98-208ENST00000461047 PSME3P61289 254 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 PSG6Q00889 435 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 Q0VFX4 171 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 KCNAB2Q13303 367 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 SNTA1Q13424 505 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 CAPRIN1Q14444 709 aaKnown RBP5.46□□□□□ -1.54
NUP98-208ENST00000461047 LARS2Q15031 903 aaKnown RBP5.46□□□□□ -1.54
NUP98-208ENST00000461047 DUSP5Q16690 384 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.46□□□□□ -1.54
NUP98-208ENST00000461047 ARHGAP11BQ3KRB8 267 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 CT45A2Q5DJT8 189 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 DCST2Q5T1A1 773 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 SLC25A25Q6KCM7 469 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 REEP3Q6NUK4 255 aa5.46□□□□□ -1.54
NUP98-208ENST00000461047 SLC30A6Q6NXT4 461 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms