RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 C1DQ13901 141 aaKnown RBP13.11□□□□□ -0.31
ERCC3-205ENST00000460485 TIGD6Q17RP2 521 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 ZNF613Q6PF04 617 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 GDPGP1Q6ZNW5 385 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 ZER1Q7Z7L7 766 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 PLXDC1Q8IUK5 500 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 B3GNT7Q8NFL0 401 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 C1orf216Q8TAB5 229 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 GPR151Q8TDV0 419 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 RLN3Q8WXF3 142 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 RFKQ969G6 155 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 VMP1Q96GC9 406 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 SLC41A3Q96GZ6 507 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 RBM18Q96H35 190 aaKnown RBP13.11□□□□□ -0.31
ERCC3-205ENST00000460485 HSPA12BQ96MM6 686 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 DGAT2Q96PD7 388 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 OR1F2PQ96R84 312 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 CCNL2Q96S94 520 aaPredicted RBP13.11□□□□□ -0.31
ERCC3-205ENST00000460485 MND1Q9BWT6 205 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 RSPO3Q9BXY4 272 aaPredicted RBP13.11□□□□□ -0.31
ERCC3-205ENST00000460485 WDR12Q9GZL7 423 aaKnown RBP13.11□□□□□ -0.31
ERCC3-205ENST00000460485 NAA50Q9GZZ1 169 aaKnown RBP13.11□□□□□ -0.31
ERCC3-205ENST00000460485 KLHL25Q9H0H3 589 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 FAM60AQ9NP50 221 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 PRTFDC1Q9NRG1 225 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 TBC1D23Q9NUY8 699 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 SOHLH2Q9NX45 425 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 SEMA5BQ9P283 1151 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 PRODH2Q9UF12 536 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.11□□□□□ -0.31
ERCC3-205ENST00000460485 CFL2Q9Y281 166 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 B3GNT3Q9Y2A9 372 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 LAMA5O15230 3695 aa13.11□□□□□ -0.31
ERCC3-205ENST00000460485 SMG1Q96Q15 3661 aaKnown RBP13.11□□□□□ -0.31
ERCC3-205ENST00000460485 ASH1LQ9NR48 2969 aaKnown RBP13.1□□□□□ -0.31
ERCC3-205ENST00000460485 LNP1A1A4G5 178 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 CDHR4A6H8M9 788 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 SGK494L7N484 410 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 DYRK3O43781 588 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 LDB3O75112 727 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 TP53P04637 393 aaPredicted RBP13.1□□□□□ -0.31
ERCC3-205ENST00000460485 HMGN1P05114 100 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 RPLP0P05388 317 aaKnown RBP13.1□□□□□ -0.31
ERCC3-205ENST00000460485 ADORA3P0DMS8 318 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 CD36P16671 472 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 CSTF2P33240 577 aaKnown RBP eCLIP13.1□□□□□ -0.31
ERCC3-205ENST00000460485 RBM34P42696 430 aaKnown RBP13.1□□□□□ -0.31
ERCC3-205ENST00000460485 MAP2K4P45985 399 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 GIPRP48546 466 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 SLC13A2Q13183 592 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 TRMT12Q53H54 448 aaKnown RBP13.1□□□□□ -0.31
ERCC3-205ENST00000460485 ARMC4Q5T2S8 1044 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 TCEAL6Q6IPX3 200 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 Q6ZPB1 254 aaPredicted RBP13.1□□□□□ -0.31
ERCC3-205ENST00000460485 USP43Q70EL4 1123 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 ZNF440Q8IYI8 595 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 OR7G1Q8NGA0 311 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 OR9Q1Q8NGQ5 310 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 OR9A4Q8NGU2 314 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 TBC1D15Q8TC07 691 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 TMEM163Q8TC26 289 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 TCEAL3Q969E4 200 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 TMEM80Q96HE8 168 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 MAP3K3Q99759 626 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 LIN28AQ9H9Z2 209 aaKnown RBP13.1□□□□□ -0.31
ERCC3-205ENST00000460485 SIAEQ9HAT2 523 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 Q9N2J8 555 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 HMG20AQ9NP66 347 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 TMEM9BQ9NQ34 198 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 MRPS18AQ9NVS2 196 aaKnown RBP13.1□□□□□ -0.31
ERCC3-205ENST00000460485 SEC14L4Q9UDX3 406 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 ERGIC3Q9Y282 383 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 CDH10Q9Y6N8 788 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 LOC400499M0QZD8 3231 aa13.1□□□□□ -0.31
ERCC3-205ENST00000460485 MN1Q10571 1320 aaPredicted RBP13.1□□□□□ -0.31
ERCC3-205ENST00000460485 TNRC6BQ9UPQ9 1833 aaKnown RBP13.09□□□□□ -0.31
ERCC3-205ENST00000460485 CPSF4LA6NMK7 179 aaKnown RBP13.09□□□□□ -0.31
ERCC3-205ENST00000460485 CDX4O14627 284 aaPredicted RBP13.09□□□□□ -0.31
ERCC3-205ENST00000460485 TOX3O15405 576 aaPredicted RBP13.09□□□□□ -0.31
ERCC3-205ENST00000460485 PRODHO43272 600 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 FCMRO60667 390 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 CBX7O95931 251 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 TGFBR2P37173 567 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 OMPP47874 163 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 CLK1P49759 484 aaKnown RBP13.09□□□□□ -0.31
ERCC3-205ENST00000460485 RAB40BQ12829 278 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 TMED1Q13445 227 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 GINS1Q14691 196 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 PRSS41Q7RTY9 318 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 ZNF550Q7Z398 422 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 SLC46A3Q7Z3Q1 461 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 GDF7Q7Z4P5 450 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 PRSS42Q7Z5A4 293 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 COMTD1Q86VU5 262 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 OR4N5Q8IXE1 308 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 CDK20Q8IZL9 346 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 OR5T3Q8NGG3 340 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 RIT1Q92963 219 aa13.09□□□□□ -0.31
ERCC3-205ENST00000460485 AHCYL2Q96HN2 611 aaKnown RBP13.09□□□□□ -0.31
ERCC3-205ENST00000460485 ART5Q96L15 291 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms