RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 C16orf62Q7Z3J2 963 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 LRRC34Q8IZ02 419 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 TNIP2Q8NFZ5 429 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 PHOSPHO1Q8TCT1 267 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 RNF138Q8WVD3 245 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 HOXB13Q92826 284 aaPredicted RBP16.95■□□□□ 0.3
USP39-209ENST00000458268 RAB8BQ92930 207 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 OR52E6Q96RD3 313 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 SLC35A5Q9BS91 424 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 PRDM14Q9GZV8 571 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 OR51I1Q9H343 314 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 ACBD3Q9H3P7 528 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 CHST11Q9NPF2 352 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 KCNJ16Q9NPI9 418 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 PCDHGB3Q9Y5G1 929 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 GPR45Q9Y5Y3 372 aa16.95■□□□□ 0.3
USP39-209ENST00000458268 AHRRA9YTQ3 701 aa16.94■□□□□ 0.3
USP39-209ENST00000458268 POLR3GO15318 223 aaPredicted RBP16.94■□□□□ 0.3
USP39-209ENST00000458268 NUDT14O95848 222 aa16.94■□□□□ 0.3
USP39-209ENST00000458268 HOXD4P09016 255 aaPredicted RBP16.94■□□□□ 0.3
USP39-209ENST00000458268 IDO1P14902 403 aa16.94■□□□□ 0.3
USP39-209ENST00000458268 POU3F2P20265 443 aaPredicted RBP16.94■□□□□ 0.3
USP39-209ENST00000458268 TBXA2RP21731 343 aa16.94■□□□□ 0.3
USP39-209ENST00000458268 UQCRC2P22695 453 aa16.94■□□□□ 0.3
USP39-209ENST00000458268 PTGER4P35408 488 aa16.94■□□□□ 0.3
USP39-209ENST00000458268 GPR68Q15743 365 aa16.94■□□□□ 0.3
USP39-209ENST00000458268 ZNF621Q6ZSS3 439 aa16.94■□□□□ 0.3
USP39-209ENST00000458268 TMCO5AQ8N6Q1 288 aa16.94■□□□□ 0.3
USP39-209ENST00000458268 FADS6Q8N9I5 356 aa16.94■□□□□ 0.3
USP39-209ENST00000458268 RFWD2Q8NHY2 731 aa16.94■□□□□ 0.3
USP39-209ENST00000458268 FAM110BQ8TC76 370 aa16.94■□□□□ 0.3
USP39-209ENST00000458268 PNPT1Q8TCS8 783 aaKnown RBP16.94■□□□□ 0.3
USP39-209ENST00000458268 ACTRT2Q8TDY3 377 aa16.94■□□□□ 0.3
USP39-209ENST00000458268 C7orf26Q96N11 449 aa16.94■□□□□ 0.3
USP39-209ENST00000458268 PANX1Q96RD7 426 aa16.94■□□□□ 0.3
USP39-209ENST00000458268 TUBA1CQ9BQE3 449 aa16.94■□□□□ 0.3
USP39-209ENST00000458268 INPP5KQ9BT40 448 aa16.94■□□□□ 0.3
USP39-209ENST00000458268 SERHL2Q9H4I8 314 aa16.94■□□□□ 0.3
USP39-209ENST00000458268 UBQLN4Q9NRR5 601 aa16.94■□□□□ 0.3
USP39-209ENST00000458268 ALG1L2C9J202 215 aa16.93■□□□□ 0.3
USP39-209ENST00000458268 FAM47E-STBD1D6RA91 191 aa16.93■□□□□ 0.3
USP39-209ENST00000458268 HNRNPRO43390 633 aaKnown RBP16.93■□□□□ 0.3
USP39-209ENST00000458268 ZIC3O60481 467 aa16.93■□□□□ 0.3
USP39-209ENST00000458268 SLC22A3O75751 556 aa16.93■□□□□ 0.3
USP39-209ENST00000458268 OR12D1P0DN82 309 aa16.93■□□□□ 0.3
USP39-209ENST00000458268 BMP5P22003 454 aa16.93■□□□□ 0.3
USP39-209ENST00000458268 AGFG1P52594 562 aaKnown RBP16.93■□□□□ 0.3
USP39-209ENST00000458268 SF3B4Q15427 424 aaKnown RBP eCLIP16.93■□□□□ 0.3
USP39-209ENST00000458268 NHSL2Q5HYW2 709 aa16.93■□□□□ 0.3
USP39-209ENST00000458268 EXOSC6Q5RKV6 272 aaKnown RBP16.93■□□□□ 0.3
USP39-209ENST00000458268 ARSKQ6UWY0 536 aa16.93■□□□□ 0.3
USP39-209ENST00000458268 CHMP1BQ7LBR1 199 aa16.93■□□□□ 0.3
USP39-209ENST00000458268 LACC1Q8IV20 430 aa16.93■□□□□ 0.3
USP39-209ENST00000458268 OR9I1Q8NGQ6 314 aa16.93■□□□□ 0.3
USP39-209ENST00000458268 XAGE5Q8WWM1 108 aa16.93■□□□□ 0.3
USP39-209ENST00000458268 C1GALT1C1Q96EU7 318 aa16.93■□□□□ 0.3
USP39-209ENST00000458268 GTPBP1O00178 669 aaKnown RBP16.92■□□□□ 0.3
USP39-209ENST00000458268 ZNF195O14628 629 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 HCRTR2O43614 444 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 SCN2BO60939 215 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 CYP7B1O75881 506 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 EPPINO95925 133 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 IL2RAP01589 272 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 PGRP06401 933 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 CDKN2CP42773 168 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 KHKP50053 298 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 CCR4P51679 360 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 ZNF41P51814 821 aaPredicted RBP16.92■□□□□ 0.3
USP39-209ENST00000458268 AQP5P55064 265 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 GFRA1P56159 465 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 STX1BP61266 288 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 CD226Q15762 336 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 NDUFAF6Q330K2 333 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 TIGD2Q4W5G0 525 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 PDCD4Q53EL6 469 aaKnown RBP16.92■□□□□ 0.3
USP39-209ENST00000458268 ATAD3BQ5T9A4 648 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 RIPPLY2Q5TAB7 128 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 MEX3BQ6ZN04 569 aaKnown RBP16.92■□□□□ 0.3
USP39-209ENST00000458268 SEM1Q6ZVN7 128 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 HMGN2P46Q86SG4 172 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 LIX1LQ8IVB5 337 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 ZNF527Q8NB42 609 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 LILRB4Q8NHJ6 448 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 MAELQ96JY0 434 aaKnown RBP16.92■□□□□ 0.3
USP39-209ENST00000458268 EBF4Q9BQW3 602 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 TCF7L2Q9NQB0 619 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 EXD2Q9NVH0 621 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 HCFC1P51610 2035 aa16.92■□□□□ 0.3
USP39-209ENST00000458268 DOCK7Q96N67 2140 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 INTS1Q8N201 2190 aaKnown RBP16.91■□□□□ 0.3
USP39-209ENST00000458268 OR2M5A3KFT3 312 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 CCDC154A6NI56 674 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 DUXAA6NLW8 204 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 CLCA1A8K7I4 914 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 HSPB2A8KAH6 182 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 H3BNH8 94 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 ANP32DO95626 131 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 C1QCP02747 245 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 OPN1LWP04000 364 aa16.91■□□□□ 0.3
USP39-209ENST00000458268 LHX2P50458 406 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms