RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 NTMQ9P121 344 aa19.3■□□□□ 0.68
CPNE1-220ENST00000458038 POLR3HQ9Y535 204 aaPredicted RBP19.3■□□□□ 0.68
CPNE1-220ENST00000458038 PRR14LQ5THK1 2151 aa19.3■□□□□ 0.68
CPNE1-220ENST00000458038 NPIPB8E9PQR5 432 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 GOLGA8RI6L899 631 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 RIPK2O43353 540 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 KLF4O43474 513 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 SEC22BO75396 215 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 NKX2-2O95096 273 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 UROSP10746 265 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 ME2P23368 584 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 PRPH2P23942 346 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 GPC1P35052 558 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 PTH2RP49190 550 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 RAC1P63000 192 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 PPP2R2BQ00005 443 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 CFAP157Q5JU67 520 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 CPTPQ5TA50 214 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 STAC2Q6ZMT1 411 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 C22orf34Q6ZV56 151 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 ESPNLQ6ZVH7 1005 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 MISPQ8IVT2 679 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 OR6Y1Q8NGX8 325 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 OR10D3Q8NH80 312 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 IGFBPL1Q8WX77 278 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 ZBED6CLQ96FA7 236 aaPredicted RBP19.29■□□□□ 0.68
CPNE1-220ENST00000458038 C16orf45Q96MC5 204 aaPredicted RBP19.29■□□□□ 0.68
CPNE1-220ENST00000458038 VDAC3Q9Y277 283 aa19.29■□□□□ 0.68
CPNE1-220ENST00000458038 COL6A5A8TX70 2615 aa19.28■□□□□ 0.68
CPNE1-220ENST00000458038 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.28■□□□□ 0.68
CPNE1-220ENST00000458038 GXYLT2A0PJZ3 443 aa19.28■□□□□ 0.68
CPNE1-220ENST00000458038 G3V2L1 256 aa19.28■□□□□ 0.68
CPNE1-220ENST00000458038 SMAD7O15105 426 aaKnown RBP19.28■□□□□ 0.68
CPNE1-220ENST00000458038 PDPK1O15530 556 aa19.28■□□□□ 0.68
CPNE1-220ENST00000458038 TBX19O60806 448 aa19.28■□□□□ 0.68
CPNE1-220ENST00000458038 GLRA3O75311 464 aa19.28■□□□□ 0.68
CPNE1-220ENST00000458038 CNOT4O95628 575 aaKnown RBP19.28■□□□□ 0.68
CPNE1-220ENST00000458038 HSPA4LO95757 839 aa19.28■□□□□ 0.68
CPNE1-220ENST00000458038 THBDP07204 575 aa19.28■□□□□ 0.68
CPNE1-220ENST00000458038 PABPC4LP0CB38 370 aaKnown RBP19.28■□□□□ 0.68
CPNE1-220ENST00000458038 DNAJB13P59910 316 aa19.28■□□□□ 0.68
CPNE1-220ENST00000458038 KIAA0040Q15053 153 aa19.28■□□□□ 0.68
CPNE1-220ENST00000458038 CCDC153Q494R4 210 aa19.28■□□□□ 0.68
CPNE1-220ENST00000458038 PPP4R4Q6NUP7 873 aa19.28■□□□□ 0.68
CPNE1-220ENST00000458038 ZCCHC12Q6PEW1 402 aa19.28■□□□□ 0.68
CPNE1-220ENST00000458038 ZNF551Q7Z340 670 aaPredicted RBP19.28■□□□□ 0.68
CPNE1-220ENST00000458038 EXOC3L1Q86VI1 746 aa19.28■□□□□ 0.68
CPNE1-220ENST00000458038 EQTNQ9NQ60 294 aa19.28■□□□□ 0.68
CPNE1-220ENST00000458038 UBQLN4Q9NRR5 601 aa19.28■□□□□ 0.68
CPNE1-220ENST00000458038 ZNF701Q9NV72 531 aaPredicted RBP19.28■□□□□ 0.68
CPNE1-220ENST00000458038 C1orf109Q9NX04 203 aa19.28■□□□□ 0.68
CPNE1-220ENST00000458038 GPR52Q9Y2T5 361 aa19.28■□□□□ 0.68
CPNE1-220ENST00000458038 ATRQ13535 2644 aa19.28■□□□□ 0.68
CPNE1-220ENST00000458038 RTTNQ86VV8 2226 aa19.27■□□□□ 0.68
CPNE1-220ENST00000458038 SLC28A1O00337 649 aa19.27■□□□□ 0.68
CPNE1-220ENST00000458038 IGKV1D-16P01601 117 aa19.27■□□□□ 0.68
CPNE1-220ENST00000458038 HPGDP15428 266 aa19.27■□□□□ 0.68
CPNE1-220ENST00000458038 SLC6A8P48029 635 aa19.27■□□□□ 0.68
CPNE1-220ENST00000458038 SERPINB4P48594 390 aa19.27■□□□□ 0.68
CPNE1-220ENST00000458038 ZNF41P51814 821 aaPredicted RBP19.27■□□□□ 0.68
CPNE1-220ENST00000458038 HSPB3Q12988 150 aa19.27■□□□□ 0.68
CPNE1-220ENST00000458038 ZNF704Q6ZNC4 412 aaPredicted RBP19.27■□□□□ 0.68
CPNE1-220ENST00000458038 IFT20Q8IY31 132 aa19.27■□□□□ 0.68
CPNE1-220ENST00000458038 ZNF611Q8N823 705 aa19.27■□□□□ 0.68
CPNE1-220ENST00000458038 OR4C3Q8NH37 302 aa19.27■□□□□ 0.68
CPNE1-220ENST00000458038 FAM110BQ8TC76 370 aa19.27■□□□□ 0.68
CPNE1-220ENST00000458038 PIK3R3Q92569 461 aa19.27■□□□□ 0.68
CPNE1-220ENST00000458038 ADGRG7Q96K78 797 aa19.27■□□□□ 0.68
CPNE1-220ENST00000458038 EGLN2Q96KS0 407 aa19.27■□□□□ 0.68
CPNE1-220ENST00000458038 HDHD5Q9BXW7 423 aa19.27■□□□□ 0.68
CPNE1-220ENST00000458038 ACSS1Q9NUB1 689 aaPredicted RBP19.27■□□□□ 0.68
CPNE1-220ENST00000458038 CCL27Q9Y4X3 112 aa19.27■□□□□ 0.68
CPNE1-220ENST00000458038 TRIM64A6NGJ6 449 aa19.26■□□□□ 0.67
CPNE1-220ENST00000458038 TRIM64BA6NI03 449 aa19.26■□□□□ 0.67
CPNE1-220ENST00000458038 HS3ST1O14792 307 aa19.26■□□□□ 0.67
CPNE1-220ENST00000458038 RGS14O43566 566 aa19.26■□□□□ 0.67
CPNE1-220ENST00000458038 OXSR1O95747 527 aaPredicted RBP19.26■□□□□ 0.67
CPNE1-220ENST00000458038 DDX5P17844 614 aaKnown RBP19.26■□□□□ 0.67
CPNE1-220ENST00000458038 PSMB1P20618 241 aaKnown RBP19.26■□□□□ 0.67
CPNE1-220ENST00000458038 EIF1P41567 113 aaKnown RBP19.26■□□□□ 0.67
CPNE1-220ENST00000458038 CCT5P48643 541 aa19.26■□□□□ 0.67
CPNE1-220ENST00000458038 MANFP55145 182 aaKnown RBP19.26■□□□□ 0.67
CPNE1-220ENST00000458038 CTU2Q2VPK5 515 aaKnown RBP19.26■□□□□ 0.67
CPNE1-220ENST00000458038 NUP43Q8NFH3 380 aa19.26■□□□□ 0.67
CPNE1-220ENST00000458038 OR2V1Q8NHB1 315 aa19.26■□□□□ 0.67
CPNE1-220ENST00000458038 SLC9A6Q92581 669 aa19.26■□□□□ 0.67
CPNE1-220ENST00000458038 MS4A4EQ96PG1 132 aa19.26■□□□□ 0.67
CPNE1-220ENST00000458038 CCT7Q99832 543 aa19.26■□□□□ 0.67
CPNE1-220ENST00000458038 TMEM204Q9BSN7 226 aa19.26■□□□□ 0.67
CPNE1-220ENST00000458038 REEP4Q9H6H4 257 aa19.26■□□□□ 0.67
CPNE1-220ENST00000458038 TIGARQ9NQ88 270 aa19.26■□□□□ 0.67
CPNE1-220ENST00000458038 EMCNQ9ULC0 261 aa19.26■□□□□ 0.67
CPNE1-220ENST00000458038 A0A1W2PQD3 144 aa19.25■□□□□ 0.67
CPNE1-220ENST00000458038 A0A1W2PRB8 838 aa19.25■□□□□ 0.67
CPNE1-220ENST00000458038 SHISA8B8ZZ34 492 aa19.25■□□□□ 0.67
CPNE1-220ENST00000458038 CXCL13O43927 109 aa19.25■□□□□ 0.67
CPNE1-220ENST00000458038 GMFGO60234 142 aa19.25■□□□□ 0.67
CPNE1-220ENST00000458038 TUBBP07437 444 aa19.25■□□□□ 0.67
CPNE1-220ENST00000458038 PSMA4P25789 261 aaKnown RBP19.25■□□□□ 0.67
CPNE1-220ENST00000458038 PCSK6P29122 969 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms