RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	ESRP2	Q9H6T0	727 aa	Known RBP	11.78	□□□□□ -0.52
SNHG17-208	ENST00000456953	NOL11	Q9H8H0	719 aa	Known RBP	11.78	□□□□□ -0.52
SNHG17-208	ENST00000456953	IPPK	Q9H8X2	491 aa		11.78	□□□□□ -0.52
SNHG17-208	ENST00000456953	STK38L	Q9Y2H1	464 aa		11.78	□□□□□ -0.52
SNHG17-208	ENST00000456953	GPR55	Q9Y2T6	319 aa	Predicted RBP	11.78	□□□□□ -0.52
SNHG17-208	ENST00000456953	IGHV4-30-2	A0A087WSY4	118 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	FOXE1	O00358	373 aa	Predicted RBP	11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	SS18L1	O75177	396 aa	Predicted RBP	11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	CRCP	O75575	148 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	OTC	P00480	354 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	PLG	P00747	810 aa	Predicted RBP	11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	HK1	P19367	917 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	EMD	P50402	254 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	CCNG1	P51959	295 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	PSPH	P78330	225 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	LCP2	Q13094	533 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	STX3	Q13277	289 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	NRF1	Q16656	503 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	PGGHG	Q32M88	737 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	NCMAP	Q5T1S8	102 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	ALKBH2	Q6NS38	261 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	FRMD7	Q6ZUT3	714 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	RPS27L	Q71UM5	84 aa	Known RBP	11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	STK32C	Q86UX6	486 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	FADS6	Q8N9I5	356 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	STEAP2	Q8NFT2	490 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	OR10H5	Q8NGA6	315 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	OR52R1	Q8NGF1	315 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	BTBD9	Q96Q07	612 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	TRMO	Q9BU70	441 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	GRIP2	Q9C0E4	1043 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	GSTO2	Q9H4Y5	243 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	ALG2	Q9H553	416 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	EML4	Q9HC35	981 aa	Known RBP	11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	NGB	Q9NPG2	151 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	PPP4R1L	Q9P1A2	415 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	GDF2	Q9UK05	429 aa	Predicted RBP	11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	SNX8	Q9Y5X2	465 aa		11.77	□□□□□ -0.53
SNHG17-208	ENST00000456953	TG	P01266	2768 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	FAM234B	A2RU67	622 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	OR2M5	A3KFT3	312 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953		H3BML4	177 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	SSX4	O60224	188 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	NPHS1	O60500	1241 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	TSPAN2	O60636	221 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	UGDH	O60701	494 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	HSPA4L	O95757	839 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	SRD5A1	P18405	259 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	CSNK2A2	P19784	350 aa	Predicted RBP	11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	IL12B	P29460	328 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	KRT20	P35900	424 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	SERPINB5	P36952	375 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	FEN1	P39748	380 aa	Known RBP	11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	DSCR9	P59020	149 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	MRPS22	P82650	360 aa	Known RBP	11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	SRSF2	Q01130	221 aa	Known RBP	11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	LOXL1	Q08397	574 aa	Predicted RBP	11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	SGCB	Q16585	318 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	CPSF6	Q16630	551 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	CTU2	Q2VPK5	515 aa	Known RBP	11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	ATG16L1	Q676U5	607 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	SLC48A1	Q6P1K1	146 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	CLEC2A	Q6UVW9	174 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	GPRIN3	Q6ZVF9	776 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	LARP4	Q71RC2	724 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	OR2M3	Q8NG83	312 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	LRRC8C	Q8TDW0	803 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	NEUROG1	Q92886	237 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	S100PBP	Q96BU1	408 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	SERPINI1	Q99574	410 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	TRAF4	Q9BUZ4	470 aa	Predicted RBP	11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	PRRG4	Q9BZD6	226 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	DSN1	Q9H410	356 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	MANSC1	Q9H8J5	431 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	ZBTB26	Q9HCK0	441 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	MID1IP1	Q9NPA3	183 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	ADAM29	Q9UKF5	820 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	CES1P1	Q9UKY3	287 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	AP4B1	Q9Y6B7	739 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	CAD	P27708	2225 aa		11.76	□□□□□ -0.53
SNHG17-208	ENST00000456953	ALPK2	Q86TB3	2170 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	C17orf51	A8MQB3	221 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	TMEM114	B3SHH9	223 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	OR7A17	O14581	309 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	GUCY1B2	O75343	617 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	CLDN9	O95484	217 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	CD8A	P01732	235 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	KLK1	P06870	262 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	CT45A8	P0DMV1	189 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	CT45A9	P0DMV2	189 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	SLC6A8	P48029	635 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	PNLIPRP2	P54317	469 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	PKNOX1	P55347	436 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	ABCE1	P61221	599 aa	Known RBP	11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	TRMT12	Q53H54	448 aa	Known RBP	11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	CT45A2	Q5DJT8	189 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	ARL13A	Q5H913	290 aa	Predicted RBP	11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	CYB5R2	Q6BCY4	276 aa		11.75	□□□□□ -0.53
SNHG17-208	ENST00000456953	DTX2	Q86UW9	622 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms