RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 NLGN3Q9NZ94 848 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 TBC1D24Q9ULP9 559 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 SLC7A7Q9UM01 511 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 CDH10Q9Y6N8 788 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 FANCMQ8IYD8 2048 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 ANKRD34BA5PLL1 514 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 ZNF860A6NHJ4 632 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 SOX1O00570 391 aaPredicted RBP17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 TGM4P49221 684 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 CDH11P55287 796 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 RPS25P62851 125 aaKnown RBP17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 ID2Q02363 134 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 MAPK14Q16539 360 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 TMEM44Q2T9K0 475 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 EIPR1Q53HC9 387 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 CCNJQ5T5M9 372 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 NXNL2Q5VZ03 156 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 C22orf42Q6IC83 251 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 NRARPQ7Z6K4 114 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 TMEFF1Q8IYR6 380 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 FAM3CQ92520 227 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 TMEM203Q969S6 136 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 TMCO6Q96DC7 493 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 MED18Q9BUE0 208 aa17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 EXOGQ9Y2C4 368 aaKnown RBP17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 YARS2Q9Y2Z4 477 aaKnown RBP17.11■□□□□ 0.33
SEMA3B-209ENST00000456560 BRWD1Q9NSI6 2320 aa17.1■□□□□ 0.33
SEMA3B-209ENST00000456560 LRP4O75096 1905 aa17.1■□□□□ 0.33
SEMA3B-209ENST00000456560 A0A087WV62 115 aa17.1■□□□□ 0.33
SEMA3B-209ENST00000456560 CH25HO95992 272 aa17.1■□□□□ 0.33
SEMA3B-209ENST00000456560 ATP1B1P05026 303 aa17.1■□□□□ 0.33
SEMA3B-209ENST00000456560 DRD1P21728 446 aa17.1■□□□□ 0.33
SEMA3B-209ENST00000456560 CD79BP40259 229 aa17.1■□□□□ 0.33
SEMA3B-209ENST00000456560 GPR68Q15743 365 aa17.1■□□□□ 0.33
SEMA3B-209ENST00000456560 QSOX2Q6ZRP7 698 aa17.1■□□□□ 0.33
SEMA3B-209ENST00000456560 SHFQ7M4L6 423 aa17.1■□□□□ 0.33
SEMA3B-209ENST00000456560 PRSS41Q7RTY9 318 aa17.1■□□□□ 0.33
SEMA3B-209ENST00000456560 ZNF619Q8N2I2 560 aa17.1■□□□□ 0.33
SEMA3B-209ENST00000456560 TMEM52Q8NDY8 209 aa17.1■□□□□ 0.33
SEMA3B-209ENST00000456560 BAHD1Q8TBE0 780 aaPredicted RBP17.1■□□□□ 0.33
SEMA3B-209ENST00000456560 DOK4Q8TEW6 326 aa17.1■□□□□ 0.33
SEMA3B-209ENST00000456560 RFKQ969G6 155 aa17.1■□□□□ 0.33
SEMA3B-209ENST00000456560 MSLNLQ96KJ4 702 aa17.1■□□□□ 0.33
SEMA3B-209ENST00000456560 CACYBPQ9HB71 228 aaKnown RBP17.1■□□□□ 0.33
SEMA3B-209ENST00000456560 LRRC72A6NJI9 287 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 C10orf142B7Z368 130 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 CYR61O00622 381 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 CDC42EP2O14613 210 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 RGS5O15539 181 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 FGF17O60258 216 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 PLOD3O60568 738 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 CLEC2LP0C7M8 214 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 PVRP15151 417 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 MRPS15P82914 257 aaKnown RBP17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 RUNX1T1Q06455 604 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 ZFP69Q49AA0 526 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 LAX1Q8IWV1 398 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 TRIM48Q8IWZ4 208 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 GALNT12Q8IXK2 581 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 PATE1Q8WXA2 126 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 ZNF649Q9BS31 505 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 TEX12Q9BXU0 123 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 CLDND1Q9NY35 253 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 PLEKHB1Q9UF11 243 aaPredicted RBP17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 MUTYHQ9UIF7 546 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 KCNE5Q9UJ90 142 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 ZNF223Q9UK11 482 aaPredicted RBP17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 SATB2Q9UPW6 733 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 GRIP1Q9Y3R0 1128 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 ENTPD2Q9Y5L3 495 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 COL4A2P08572 1712 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 LYPD3O95274 346 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 DBIP07108 87 aaKnown RBP17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 AKT2P31751 481 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 SLC1A3P43003 542 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 MGAT2Q10469 447 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 DCST2Q5T1A1 773 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 CD200R1LQ6Q8B3 271 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 TMPRSS11AQ6ZMR5 421 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 Q6ZSR6 202 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 RNF44Q7L0R7 432 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 VASH1Q7L8A9 365 aaPredicted RBP17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 GPBAR1Q8TDU6 330 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 UFD1Q92890 307 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 RERGQ96A58 199 aaPredicted RBP17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 NEDD4LQ96PU5 975 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 SNX18Q96RF0 628 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 ADAP2Q9NPF8 381 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 DUSP22Q9NRW4 184 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 FBXO34Q9NWN3 711 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 CMAHPQ9Y471 501 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 HS3ST3A1Q9Y663 406 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 PIAS3Q9Y6X2 628 aa17.09■□□□□ 0.33
SEMA3B-209ENST00000456560 ARHGEF17Q96PE2 2063 aaPredicted RBP17.08■□□□□ 0.33
SEMA3B-209ENST00000456560 C2orf74A8MZ97 194 aa17.08■□□□□ 0.33
SEMA3B-209ENST00000456560 LRRTM2O43300 516 aa17.08■□□□□ 0.33
SEMA3B-209ENST00000456560 LDB3O75112 727 aa17.08■□□□□ 0.33
SEMA3B-209ENST00000456560 STX11O75558 287 aa17.08■□□□□ 0.33
SEMA3B-209ENST00000456560 GPR75O95800 540 aa17.08■□□□□ 0.33
SEMA3B-209ENST00000456560 PRG2P13727 222 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms