RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 EXOSC6Q5RKV6 272 aaKnown RBP19.55■□□□□ 0.72
SEC22C-213ENST00000456222 CCNJQ5T5M9 372 aa19.55■□□□□ 0.72
SEC22C-213ENST00000456222 EEF1A1P5Q5VTE0 462 aa19.55■□□□□ 0.72
SEC22C-213ENST00000456222 C22orf34Q6ZV56 151 aa19.55■□□□□ 0.72
SEC22C-213ENST00000456222 KRTAP1-3Q8IUG1 177 aa19.55■□□□□ 0.72
SEC22C-213ENST00000456222 DDIASQ8IXT1 998 aa19.55■□□□□ 0.72
SEC22C-213ENST00000456222 METTL25Q8N6Q8 603 aa19.55■□□□□ 0.72
SEC22C-213ENST00000456222 CDRT4Q8N9R6 151 aa19.55■□□□□ 0.72
SEC22C-213ENST00000456222 WFDC11Q8NEX6 87 aa19.55■□□□□ 0.72
SEC22C-213ENST00000456222 ZFP28Q8NHY6 868 aa19.55■□□□□ 0.72
SEC22C-213ENST00000456222 MS4A4EQ96PG1 132 aa19.55■□□□□ 0.72
SEC22C-213ENST00000456222 GSX1Q9H4S2 264 aaPredicted RBP19.55■□□□□ 0.72
SEC22C-213ENST00000456222 C3orf14Q9HBI5 128 aa19.55■□□□□ 0.72
SEC22C-213ENST00000456222 ACSS1Q9NUB1 689 aaPredicted RBP19.55■□□□□ 0.72
SEC22C-213ENST00000456222 MID2Q9UJV3 735 aa19.55■□□□□ 0.72
SEC22C-213ENST00000456222 ZNF175Q9Y473 711 aa19.55■□□□□ 0.72
SEC22C-213ENST00000456222 TRAF6Q9Y4K3 522 aa19.55■□□□□ 0.72
SEC22C-213ENST00000456222 TTC36A6NLP5 189 aa19.54■□□□□ 0.72
SEC22C-213ENST00000456222 DEFB108AA8MXU0 73 aa19.54■□□□□ 0.72
SEC22C-213ENST00000456222 OPN1LWP04000 364 aa19.54■□□□□ 0.72
SEC22C-213ENST00000456222 FGF4P08620 206 aa19.54■□□□□ 0.72
SEC22C-213ENST00000456222 CREB1P16220 341 aa19.54■□□□□ 0.72
SEC22C-213ENST00000456222 CD79BP40259 229 aa19.54■□□□□ 0.72
SEC22C-213ENST00000456222 PPP2R2AP63151 447 aa19.54■□□□□ 0.72
SEC22C-213ENST00000456222 GLYR1Q49A26 553 aaPredicted RBP19.54■□□□□ 0.72
SEC22C-213ENST00000456222 CAMKMTQ7Z624 323 aa19.54■□□□□ 0.72
SEC22C-213ENST00000456222 ZNF610Q8N9Z0 462 aa19.54■□□□□ 0.72
SEC22C-213ENST00000456222 OR7A2PQ8NGA2 310 aa19.54■□□□□ 0.72
SEC22C-213ENST00000456222 CEP70Q8NHQ1 597 aa19.54■□□□□ 0.72
SEC22C-213ENST00000456222 FAM120BQ96EK7 910 aaKnown RBP19.54■□□□□ 0.72
SEC22C-213ENST00000456222 C3orf30Q96M34 536 aa19.54■□□□□ 0.72
SEC22C-213ENST00000456222 AP4B1Q9Y6B7 739 aa19.54■□□□□ 0.72
SEC22C-213ENST00000456222 ZANQ9Y493 2812 aa19.53■□□□□ 0.72
SEC22C-213ENST00000456222 LINC01387J3KSC0 135 aa19.53■□□□□ 0.72
SEC22C-213ENST00000456222 CTIFO43310 598 aaKnown RBP19.53■□□□□ 0.72
SEC22C-213ENST00000456222 EMC8O43402 210 aa19.53■□□□□ 0.72
SEC22C-213ENST00000456222 NPHS1O60500 1241 aa19.53■□□□□ 0.72
SEC22C-213ENST00000456222 GOSR1O95249 250 aa19.53■□□□□ 0.72
SEC22C-213ENST00000456222 CHEK2O96017 543 aa19.53■□□□□ 0.72
SEC22C-213ENST00000456222 NGFRP08138 427 aa19.53■□□□□ 0.72
SEC22C-213ENST00000456222 TBXA2RP21731 343 aa19.53■□□□□ 0.72
SEC22C-213ENST00000456222 PSMA4P25789 261 aaKnown RBP19.53■□□□□ 0.72
SEC22C-213ENST00000456222 EEFSECP57772 596 aaKnown RBP19.53■□□□□ 0.72
SEC22C-213ENST00000456222 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.53■□□□□ 0.72
SEC22C-213ENST00000456222 XKR7Q5GH72 579 aa19.53■□□□□ 0.72
SEC22C-213ENST00000456222 ZNF550Q7Z398 422 aa19.53■□□□□ 0.72
SEC22C-213ENST00000456222 NDRG3Q9UGV2 375 aa19.53■□□□□ 0.72
SEC22C-213ENST00000456222 ATP6V1HQ9UI12 483 aa19.53■□□□□ 0.72
SEC22C-213ENST00000456222 EDARQ9UNE0 448 aa19.53■□□□□ 0.72
SEC22C-213ENST00000456222 TMED5Q9Y3A6 229 aa19.53■□□□□ 0.72
SEC22C-213ENST00000456222 NSD1Q96L73 2696 aaPredicted RBP19.52■□□□□ 0.72
SEC22C-213ENST00000456222 EIF1AYO14602 144 aaKnown RBP19.52■□□□□ 0.72
SEC22C-213ENST00000456222 SCAMP2O15127 329 aaKnown RBP19.52■□□□□ 0.72
SEC22C-213ENST00000456222 NDUFB5O43674 189 aa19.52■□□□□ 0.72
SEC22C-213ENST00000456222 PEX11AO75192 247 aa19.52■□□□□ 0.72
SEC22C-213ENST00000456222 LAMP1P11279 417 aa19.52■□□□□ 0.72
SEC22C-213ENST00000456222 UGT2B10P36537 528 aa19.52■□□□□ 0.72
SEC22C-213ENST00000456222 RNF144AP50876 292 aaPredicted RBP19.52■□□□□ 0.72
SEC22C-213ENST00000456222 VSNL1P62760 191 aa19.52■□□□□ 0.72
SEC22C-213ENST00000456222 PTGR1Q14914 329 aa19.52■□□□□ 0.72
SEC22C-213ENST00000456222 CD226Q15762 336 aa19.52■□□□□ 0.72
SEC22C-213ENST00000456222 CTU2Q2VPK5 515 aaKnown RBP19.52■□□□□ 0.72
SEC22C-213ENST00000456222 VPS26BQ4G0F5 336 aa19.52■□□□□ 0.72
SEC22C-213ENST00000456222 TCP10LQ8TDR4 215 aa19.52■□□□□ 0.72
SEC22C-213ENST00000456222 POM121Q96HA1 1249 aa19.52■□□□□ 0.72
SEC22C-213ENST00000456222 SH3YL1Q96HL8 342 aaPredicted RBP19.52■□□□□ 0.72
SEC22C-213ENST00000456222 ADGRG7Q96K78 797 aa19.52■□□□□ 0.72
SEC22C-213ENST00000456222 IQCGQ9H095 443 aaKnown RBP19.52■□□□□ 0.72
SEC22C-213ENST00000456222 LGALS13Q9UHV8 139 aa19.52■□□□□ 0.72
SEC22C-213ENST00000456222 CLEC4AQ9UMR7 237 aa19.52■□□□□ 0.72
SEC22C-213ENST00000456222 A0A1W2PRB8 838 aa19.51■□□□□ 0.71
SEC22C-213ENST00000456222 CASKO14936 926 aa19.51■□□□□ 0.71
SEC22C-213ENST00000456222 OIP5O43482 229 aa19.51■□□□□ 0.71
SEC22C-213ENST00000456222 HMGN2P05204 90 aaKnown RBP19.51■□□□□ 0.71
SEC22C-213ENST00000456222 ALOX5P09917 674 aa19.51■□□□□ 0.71
SEC22C-213ENST00000456222 NUDT17P0C025 328 aa19.51■□□□□ 0.71
SEC22C-213ENST00000456222 IL11P20809 199 aa19.51■□□□□ 0.71
SEC22C-213ENST00000456222 HOXC12P31275 282 aa19.51■□□□□ 0.71
SEC22C-213ENST00000456222 ASMTP46597 345 aa19.51■□□□□ 0.71
SEC22C-213ENST00000456222 EIF1AXP47813 144 aaKnown RBP19.51■□□□□ 0.71
SEC22C-213ENST00000456222 PCYT1AP49585 367 aa19.51■□□□□ 0.71
SEC22C-213ENST00000456222 PLPPR5Q32ZL2 321 aa19.51■□□□□ 0.71
SEC22C-213ENST00000456222 CXorf67Q86X51 503 aaPredicted RBP19.51■□□□□ 0.71
SEC22C-213ENST00000456222 GTPBP8Q8N3Z3 284 aaPredicted RBP19.51■□□□□ 0.71
SEC22C-213ENST00000456222 POC1BQ8TC44 478 aa19.51■□□□□ 0.71
SEC22C-213ENST00000456222 JADE3Q92613 823 aa19.51■□□□□ 0.71
SEC22C-213ENST00000456222 CDS1Q92903 461 aa19.51■□□□□ 0.71
SEC22C-213ENST00000456222 MTERF3Q96E29 417 aa19.51■□□□□ 0.71
SEC22C-213ENST00000456222 MARK4Q96L34 752 aa19.51■□□□□ 0.71
SEC22C-213ENST00000456222 C1orf50Q9BV19 199 aa19.51■□□□□ 0.71
SEC22C-213ENST00000456222 TMEM185BQ9H7F4 350 aa19.51■□□□□ 0.71
SEC22C-213ENST00000456222 ZCCHC3Q9NUD5 404 aaKnown RBP19.51■□□□□ 0.71
SEC22C-213ENST00000456222 MED17Q9NVC6 651 aa19.51■□□□□ 0.71
SEC22C-213ENST00000456222 FREM1Q5H8C1 2179 aa19.51■□□□□ 0.71
SEC22C-213ENST00000456222 DSCAMO60469 2012 aa19.51■□□□□ 0.71
SEC22C-213ENST00000456222 RAI1Q7Z5J4 1906 aaPredicted RBP19.51■□□□□ 0.71
SEC22C-213ENST00000456222 NPIPA5A0A0B4J1W7 369 aa19.5■□□□□ 0.71
SEC22C-213ENST00000456222 NPIPA7E9PJI5 369 aa19.5■□□□□ 0.71
SEC22C-213ENST00000456222 SLU7O95391 586 aaKnown RBP19.5■□□□□ 0.71
SEC22C-213ENST00000456222 NPIPA8P0DM63 369 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms