RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 ZNF274Q96GC6 653 aaPredicted RBP2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 ZIM3Q96PE6 472 aa2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 GPA33Q99795 319 aa2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 ALG12Q9BV10 488 aa2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 FTHL17Q9BXU8 183 aa2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 CRNKL1Q9BZJ0 848 aaKnown RBP2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 TRPV6Q9H1D0 765 aa2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 LIME1Q9H400 295 aa2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 EHD1Q9H4M9 534 aa2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 WDR76Q9H967 626 aa2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 CALHM2Q9HA72 323 aa2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 FANCEQ9HB96 536 aa2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 S100A14Q9HCY8 104 aa2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 ZNHIT6Q9NWK9 470 aaKnown RBP2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 VPS54Q9P1Q0 977 aa2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 NARFQ9UHQ1 456 aa2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 KIAA1257Q9ULG3 409 aa2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 MRPS33Q9Y291 106 aaKnown RBP2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 SLC6A5Q9Y345 797 aa2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 ZCCHC11Q5TAX3 1644 aaKnown RBP2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 PFASO15067 1338 aa2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 SF3B1O75533 1304 aaKnown RBP eCLIP2.66□□□□□ -1.989e-7■■■■■ 57.4
R3HDM1-212ENST00000456040 PHLPP2Q6ZVD8 1323 aa2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 PLXNC1O60486 1568 aa2.66□□□□□ -1.98
R3HDM1-212ENST00000456040 ADGRL1O94910 1474 aa2.65□□□□□ -1.98
R3HDM1-212ENST00000456040 MBD5Q9P267 1494 aa2.65□□□□□ -1.98
R3HDM1-212ENST00000456040 LRRIQ1Q96JM4 1722 aa2.65□□□□□ -1.98
R3HDM1-212ENST00000456040 ROCK2O75116 1388 aaKnown RBP2.65□□□□□ -1.98
R3HDM1-212ENST00000456040 SYCP2Q9BX26 1530 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 KDM5DQ9BY66 1539 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 ARHGEF12Q9NZN5 1544 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 A0A075B6Q4 140 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 ARHGEF35A5YM69 484 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 FOXI3A8MTJ6 420 aaPredicted RBP2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 MEI4A8MW99 385 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 KIF2AO00139 706 aaPredicted RBP2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 EEF2KO00418 725 aaKnown RBP2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 CHUKO15111 745 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 CASC3O15234 703 aaKnown RBP2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 NME2P1O60361 137 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 SRPX2O60687 465 aaPredicted RBP2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 FRAT2O75474 233 aaPredicted RBP2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 ECI2O75521 394 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 TM7SF2O76062 418 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 SYNGR4O95473 234 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 S100A9P06702 114 aaKnown RBP2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 STAG3L3P0CL85 134 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 UMPSP11172 480 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 CCDC130P13994 396 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 ACKR3P25106 362 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 CHI3L1P36222 383 aaPredicted RBP2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 PTGFRP43088 359 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 SSR1P43307 286 aaKnown RBP2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 TNFRSF4P43489 277 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 BRCC3P46736 316 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 TNFSF10P50591 281 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 CCL11P51671 97 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 KCNK10P57789 538 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 MYBPC1Q00872 1141 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 SRSF5Q13243 272 aaKnown RBP2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 GPR50Q13585 617 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 DOC2AQ14183 400 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 ARHGAP19Q14CB8 494 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 WDR43Q15061 677 aaKnown RBP eCLIP2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 TRIP10Q15642 601 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 STX1AQ16623 288 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 PCK2Q16822 640 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 SLC22A6Q4U2R8 563 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 BCL7AQ4VC05 210 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 AGKQ53H12 422 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 ATF7IP2Q5U623 682 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 IL23RQ5VWK5 629 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 LIPKQ5VXJ0 399 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 KRTAP11-1Q8IUC1 163 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 OR6T1Q8NGN1 323 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 PNPT1Q8TCS8 783 aaKnown RBP2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 RLN3Q8WXF3 142 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 PHYHIPQ92561 330 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 SEPT8Q92599 483 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 OSTF1Q92882 214 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 DHTKD1Q96HY7 919 aaPredicted RBP2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 CXorf58Q96LI9 332 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 RAB40CQ96S21 281 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 MRPL13Q9BYD1 178 aaKnown RBP2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 YTHDF1Q9BYJ9 559 aaKnown RBP2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 NACA2Q9H009 215 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 WWP1Q9H0M0 922 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 MAGT1Q9H0U3 335 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 VCPKMTQ9H867 229 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 MED17Q9NVC6 651 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 ANAPC11Q9NYG5 84 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 DHRS4-AS1Q9P1J3 65 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 NYAP2Q9P242 653 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 FBXO7Q9Y3I1 522 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 CROCC2H7BZ55 1655 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 PTPRKQ15262 1439 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 SCAPERQ9BY12 1400 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 UMODL1Q5DID0 1318 aa2.65□□□□□ -1.99
R3HDM1-212ENST00000456040 MROH5Q6ZUA9 1318 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms