RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 CHMP6Q96FZ7 201 aa15.74■□□□□ 0.11
USP39-208ENST00000455732 SLC35G5Q96KT7 338 aa15.74■□□□□ 0.11
USP39-208ENST00000455732 OR7D2Q96RA2 312 aa15.74■□□□□ 0.11
USP39-208ENST00000455732 TTYH2Q9BSA4 534 aa15.74■□□□□ 0.11
USP39-208ENST00000455732 SERHL2Q9H4I8 314 aa15.74■□□□□ 0.11
USP39-208ENST00000455732 FBXO34Q9NWN3 711 aa15.74■□□□□ 0.11
USP39-208ENST00000455732 DKKL1Q9UK85 242 aa15.74■□□□□ 0.11
USP39-208ENST00000455732 CSMD1Q96PZ7 3565 aa15.74■□□□□ 0.11
USP39-208ENST00000455732 AHRRA9YTQ3 701 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 FAM47E-STBD1D6RA91 191 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 ZIC3O60481 467 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 SLC22A3O75751 556 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 AK1P00568 194 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 IL6P05231 212 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 GLI4P10075 376 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 MATN1P21941 496 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 CHMP24386 653 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 CHRNB4P30926 498 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 IDH3AP50213 366 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 DGKQP52824 942 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 STX5Q13190 355 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 SF3B4Q15427 424 aaKnown RBP eCLIP15.73■□□□□ 0.11
USP39-208ENST00000455732 ACSF3Q4G176 576 aaPredicted RBP15.73■□□□□ 0.11
USP39-208ENST00000455732 DCST1Q5T197 706 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 SAXO2Q658L1 398 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 AAGABQ6PD74 315 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 CCDC71Q8IV32 467 aaPredicted RBP15.73■□□□□ 0.11
USP39-208ENST00000455732 MISPQ8IVT2 679 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 CHDHQ8NE62 594 aaPredicted RBP15.73■□□□□ 0.11
USP39-208ENST00000455732 OR5D16Q8NGK9 328 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 LILRB4Q8NHJ6 448 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 DUSP19Q8WTR2 217 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 NEURL3Q96EH8 262 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 WDYHV1Q96HA8 205 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 MARK4Q96L34 752 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 OR52E6Q96RD3 313 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 CCDC28BQ9BUN5 200 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 HOXD1Q9GZZ0 328 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 DSN1Q9H410 356 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 PTGES2Q9H7Z7 377 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 TCF7L2Q9NQB0 619 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 KCNE3Q9Y6H6 103 aa15.73■□□□□ 0.11
USP39-208ENST00000455732 C9JVG2 144 aa15.72■□□□□ 0.11
USP39-208ENST00000455732 NPIPB9F8W1W9 429 aa15.72■□□□□ 0.11
USP39-208ENST00000455732 POLR3GO15318 223 aaPredicted RBP15.72■□□□□ 0.11
USP39-208ENST00000455732 NDUFB5O43674 189 aa15.72■□□□□ 0.11
USP39-208ENST00000455732 CPSF4O95639 269 aaKnown RBP15.72■□□□□ 0.11
USP39-208ENST00000455732 AGR2O95994 175 aa15.72■□□□□ 0.11
USP39-208ENST00000455732 CPN1P15169 458 aa15.72■□□□□ 0.11
USP39-208ENST00000455732 ATP6V1C1P21283 382 aa15.72■□□□□ 0.11
USP39-208ENST00000455732 ZFP36L2P47974 494 aaKnown RBP15.72■□□□□ 0.11
USP39-208ENST00000455732 B3GALT5-AS1P59052 145 aa15.72■□□□□ 0.11
USP39-208ENST00000455732 RPS26P62854 115 aaKnown RBP15.72■□□□□ 0.11
USP39-208ENST00000455732 RIPPLY2Q5TAB7 128 aa15.72■□□□□ 0.11
USP39-208ENST00000455732 ENPP6Q6UWR7 440 aa15.72■□□□□ 0.11
USP39-208ENST00000455732 MSANTD1Q6ZTZ1 278 aa15.72■□□□□ 0.11
USP39-208ENST00000455732 MCEMP1Q8IX19 187 aa15.72■□□□□ 0.11
USP39-208ENST00000455732 CLEC4FQ8N1N0 589 aa15.72■□□□□ 0.11
USP39-208ENST00000455732 MIER2Q8N344 545 aa15.72■□□□□ 0.11
USP39-208ENST00000455732 TRIML2Q8N7C3 387 aa15.72■□□□□ 0.11
USP39-208ENST00000455732 C1GALT1C1Q96EU7 318 aa15.72■□□□□ 0.11
USP39-208ENST00000455732 ENKD1Q9H0I2 346 aa15.72■□□□□ 0.11
USP39-208ENST00000455732 RUBCNLQ9H714 662 aa15.72■□□□□ 0.11
USP39-208ENST00000455732 MED11Q9P086 117 aa15.72■□□□□ 0.11
USP39-208ENST00000455732 PDZD2O15018 2839 aa15.72■□□□□ 0.11
USP39-208ENST00000455732 SCDO00767 359 aa15.71■□□□□ 0.11
USP39-208ENST00000455732 GUSBP08236 651 aa15.71■□□□□ 0.11
USP39-208ENST00000455732 SNRPB2P08579 225 aaKnown RBP15.71■□□□□ 0.11
USP39-208ENST00000455732 HPGDP15428 266 aa15.71■□□□□ 0.11
USP39-208ENST00000455732 MSX1P28360 303 aa15.71■□□□□ 0.11
USP39-208ENST00000455732 LHX2P50458 406 aa15.71■□□□□ 0.11
USP39-208ENST00000455732 AQP5P55064 265 aa15.71■□□□□ 0.11
USP39-208ENST00000455732 IRX1P78414 480 aaPredicted RBP15.71■□□□□ 0.11
USP39-208ENST00000455732 TXNL4AP83876 142 aaKnown RBP15.71■□□□□ 0.11
USP39-208ENST00000455732 TFF3Q07654 80 aa15.71■□□□□ 0.11
USP39-208ENST00000455732 GLYR1Q49A26 553 aaPredicted RBP15.71■□□□□ 0.11
USP39-208ENST00000455732 HEPHL1Q6MZM0 1159 aa15.71■□□□□ 0.11
USP39-208ENST00000455732 LACC1Q8IV20 430 aa15.71■□□□□ 0.11
USP39-208ENST00000455732 ZNF527Q8NB42 609 aa15.71■□□□□ 0.11
USP39-208ENST00000455732 ZPLD1Q8TCW7 415 aa15.71■□□□□ 0.11
USP39-208ENST00000455732 SFXN2Q96NB2 322 aa15.71■□□□□ 0.11
USP39-208ENST00000455732 PANX1Q96RD7 426 aa15.71■□□□□ 0.11
USP39-208ENST00000455732 SDF2Q99470 211 aa15.71■□□□□ 0.11
USP39-208ENST00000455732 TREX2Q9BQ50 279 aaPredicted RBP15.71■□□□□ 0.11
USP39-208ENST00000455732 SLC35A5Q9BS91 424 aa15.71■□□□□ 0.11
USP39-208ENST00000455732 OR51I1Q9H343 314 aa15.71■□□□□ 0.11
USP39-208ENST00000455732 ALKBH4Q9NXW9 302 aa15.71■□□□□ 0.11
USP39-208ENST00000455732 CAMK2AQ9UQM7 478 aa15.71■□□□□ 0.11
USP39-208ENST00000455732 MED12LQ86YW9 2145 aa15.71■□□□□ 0.11
USP39-208ENST00000455732 A0A0G2JNJ9 132 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 CCDC154A6NI56 674 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 CD8B2A6NJW9 211 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 LINC01387J3KSC0 135 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 TOXO94900 526 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 EPPINO95925 133 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 COX6B1P14854 86 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 ADH7P40394 386 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 KHKP50053 298 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 BCL2A1Q16548 175 aa15.7■□□□□ 0.1
USP39-208ENST00000455732 ARHGAP11BQ3KRB8 267 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms