RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 OXSR1O95747 527 aaPredicted RBP10.61□□□□□ -0.71
SCN9A-204ENST00000452182 P04436 131 aa10.61□□□□□ -0.71
SCN9A-204ENST00000452182 NME2P22392 152 aa10.61□□□□□ -0.71
SCN9A-204ENST00000452182 ADH7P40394 386 aa10.61□□□□□ -0.71
SCN9A-204ENST00000452182 CLK3P49761 638 aaKnown RBP10.61□□□□□ -0.71
SCN9A-204ENST00000452182 GPR68Q15743 365 aa10.61□□□□□ -0.71
SCN9A-204ENST00000452182 CCDC80Q76M96 950 aa10.61□□□□□ -0.71
SCN9A-204ENST00000452182 IFNEQ86WN2 208 aa10.61□□□□□ -0.71
SCN9A-204ENST00000452182 POGLUT1Q8NBL1 392 aa10.61□□□□□ -0.71
SCN9A-204ENST00000452182 TMEM178AQ8NBL3 297 aa10.61□□□□□ -0.71
SCN9A-204ENST00000452182 GRHL3Q8TE85 626 aa10.61□□□□□ -0.71
SCN9A-204ENST00000452182 C5orf34Q96MH7 638 aa10.61□□□□□ -0.71
SCN9A-204ENST00000452182 ZNF607Q96SK3 696 aa10.61□□□□□ -0.71
SCN9A-204ENST00000452182 KCTD14Q9BQ13 255 aaPredicted RBP10.61□□□□□ -0.71
SCN9A-204ENST00000452182 SLC25A18Q9H1K4 315 aa10.61□□□□□ -0.71
SCN9A-204ENST00000452182 LRMDAQ9H2I8 198 aa10.61□□□□□ -0.71
SCN9A-204ENST00000452182 PIF1Q9H611 641 aa10.61□□□□□ -0.71
SCN9A-204ENST00000452182 METTL7AQ9H8H3 244 aa10.61□□□□□ -0.71
SCN9A-204ENST00000452182 FLRT3Q9NZU0 649 aa10.61□□□□□ -0.71
SCN9A-204ENST00000452182 KCNE5Q9UJ90 142 aa10.61□□□□□ -0.71
SCN9A-204ENST00000452182 B3GNT3Q9Y2A9 372 aa10.61□□□□□ -0.71
SCN9A-204ENST00000452182 KLF13Q9Y2Y9 288 aaPredicted RBP10.61□□□□□ -0.71
SCN9A-204ENST00000452182 CSAG2Q9Y5P2 127 aa10.61□□□□□ -0.71
SCN9A-204ENST00000452182 GPC6Q9Y625 555 aaPredicted RBP10.61□□□□□ -0.71
SCN9A-204ENST00000452182 BOD1L1Q8NFC6 3051 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 EML6Q6ZMW3 1958 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 ADAM10O14672 748 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 GCM2O75603 506 aaPredicted RBP10.6□□□□□ -0.71
SCN9A-204ENST00000452182 SERPINB7O75635 380 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 DNAJC8O75937 253 aaPredicted RBP10.6□□□□□ -0.71
SCN9A-204ENST00000452182 PDE9AO76083 593 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 DBIP07108 87 aaKnown RBP10.6□□□□□ -0.71
SCN9A-204ENST00000452182 THBS1P07996 1170 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 HPGDP15428 266 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 ENDOUP21128 410 aaKnown RBP10.6□□□□□ -0.71
SCN9A-204ENST00000452182 CNR1P21554 472 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 PTGDSP41222 190 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 GAS1P54826 345 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 NCALDP61601 193 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 CEACAM7Q14002 265 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 ZNF169Q14929 603 aaPredicted RBP10.6□□□□□ -0.71
SCN9A-204ENST00000452182 ZNF766Q5HY98 468 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 RPS26P11Q5JNZ5 115 aaPredicted RBP10.6□□□□□ -0.71
SCN9A-204ENST00000452182 RPUSD3Q6P087 351 aaKnown RBP10.6□□□□□ -0.71
SCN9A-204ENST00000452182 PCSK4Q6UW60 755 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 APOOLQ6UXV4 268 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 OLIG3Q7RTU3 272 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 PATL1Q86TB9 770 aaKnown RBP10.6□□□□□ -0.71
SCN9A-204ENST00000452182 KRT73Q86Y46 540 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 PTRH1Q86Y79 214 aaKnown RBP10.6□□□□□ -0.71
SCN9A-204ENST00000452182 MISPQ8IVT2 679 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 PEX5LQ8IYB4 626 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 ZG16BQ96DA0 208 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 SPATA5L1Q9BVQ7 753 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 OSBPL11Q9BXB4 747 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 TBL1XR1Q9BZK7 514 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 MMADHCQ9H3L0 296 aaPredicted RBP10.6□□□□□ -0.71
SCN9A-204ENST00000452182 PROK2Q9HC23 129 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 USP22Q9UPT9 525 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 DTNAQ9Y4J8 743 aa10.6□□□□□ -0.71
SCN9A-204ENST00000452182 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.6□□□□□ -0.71
SCN9A-204ENST00000452182 CNTRLQ7Z7A1 2325 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 KLRC4-KLRK1H3BQV0 150 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 GSC2O15499 205 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 ELOAQ14241 798 aaKnown RBP10.59□□□□□ -0.71
SCN9A-204ENST00000452182 FGFBP1Q14512 234 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 MAPK14Q16539 360 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 ZSWIM7Q19AV6 140 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 PDZK1Q5T2W1 519 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 FNDC7Q5VTL7 733 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 PGM2L1Q6PCE3 622 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 ASRGL1Q7L266 308 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 CMIPQ8IY22 773 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 RNF148Q8N7C7 305 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 LSM14AQ8ND56 463 aaKnown RBP10.59□□□□□ -0.71
SCN9A-204ENST00000452182 BHLHE22Q8NFJ8 381 aaPredicted RBP10.59□□□□□ -0.71
SCN9A-204ENST00000452182 OR52P1PQ8NH57 321 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 PNPLA2Q96AD5 504 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 TMEM41AQ96HV5 264 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 FAM173AQ9BQD7 235 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 DOHHQ9BU89 302 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 QRSL1Q9H0R6 528 aaKnown RBP10.59□□□□□ -0.71
SCN9A-204ENST00000452182 ZNF71Q9NQZ8 489 aaPredicted RBP10.59□□□□□ -0.71
SCN9A-204ENST00000452182 SDHAF3Q9NRP4 125 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 DEPPQ9NTK1 212 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 KLRF1Q9NZS2 232 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 GMPR2Q9P2T1 348 aaKnown RBP10.59□□□□□ -0.71
SCN9A-204ENST00000452182 IFT52Q9Y366 437 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 WIF1Q9Y5W5 379 aa10.59□□□□□ -0.71
SCN9A-204ENST00000452182 IGLV3-32A0A0A0MS00 114 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 NPIPA5A0A0B4J1W7 369 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 CENPVL1A0A0U1RR11 272 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 SERINC4A6NH21 518 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 NPIPA7E9PJI5 369 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 H3BNH8 94 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 NDUFB5O43674 189 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 TRIM3O75382 744 aaPredicted RBP10.58□□□□□ -0.72
SCN9A-204ENST00000452182 MFN2O95140 757 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 ANGPTL1O95841 491 aa10.58□□□□□ -0.72
SCN9A-204ENST00000452182 PABPC4LP0CB38 370 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms