RNA–Protein interactions for RNA: ENST00000450428.5

RAB11FIP3-205, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2 BASIC

Gene RAB11FIP3, Length 3,203 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-205ENST00000450428 GLOD5A6NK44 160 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 SEC14L5O43304 696 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 RP2O75695 350 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 F11P03951 625 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 ATXN8OSP0DMR3 200 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 PAICSP22234 425 aaKnown RBP11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 TIA1P31483 386 aaKnown RBP eCLIP11.28□□□□□ -0.69e-7■■■■□ 22.9
RAB11FIP3-205ENST00000450428 PPM1AP35813 382 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 PFN3P60673 137 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 TAP2Q03519 686 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 CNTN1Q12860 1018 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 TPBGQ13641 420 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 PLPP4Q5VZY2 271 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 ZNF770Q6IQ21 691 aaPredicted RBP11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 SLC36A4Q6YBV0 504 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 TMPRSS9Q7Z410 1059 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 CBLN2Q8IUK8 224 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 OR5M3Q8NGP4 307 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 TRMT2BQ96GJ1 504 aaKnown RBP11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 SLC39A1Q9NY26 324 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 E9PQ18 207 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 GAPDHSO14556 408 aaPredicted RBP11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 RECKO95980 971 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 ACP2P11117 423 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 CR2P20023 1033 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 MMP12P39900 470 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 ASMTP46597 345 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 SWI5Q1ZZU3 235 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 ZNF697Q5TEC3 545 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 C12orf73Q69YU5 71 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 HAGHLQ6PII5 290 aaPredicted RBP11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 KREMEN2Q8NCW0 462 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 MYLIPQ8WY64 445 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 THAP4Q8WY91 577 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 RELTQ969Z4 430 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 TRIM43Q96BQ3 446 aaPredicted RBP11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 SLC38A3Q99624 504 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 CMSS1Q9BQ75 279 aaKnown RBP11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 HCFC1R1Q9NWW0 138 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 SAGE1Q9NXZ1 904 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 TNFRSF10DQ9UBN6 386 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 LIPT1Q9Y234 373 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 MYO9BQ13459 2157 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 MEIS3P1A6NDR6 274 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 TRABD2BA6NFA1 517 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 FAM170BA6NMN3 283 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 E9PI62 339 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 CHST10O43529 356 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 SGCEO43556 437 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 PRICKLE3O43900 615 aaPredicted RBP11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 PTP4A3O75365 173 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 SOX30O94993 753 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 FUT1P19526 365 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 NFYAP23511 347 aaPredicted RBP11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 ACADLP28330 430 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 SPAM1P38567 509 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 NSG1P42857 185 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 SLBPQ14493 270 aaKnown RBP eCLIP11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 ZNF630Q2M218 657 aaPredicted RBP11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 SFXN4Q6P4A7 337 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 AGTRAPQ6RW13 159 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 TRMT11Q7Z4G4 463 aaKnown RBP11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 COMTD1Q86VU5 262 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 PDZD9Q8IXQ8 264 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 SLC22A8Q8TCC7 542 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 TEFMQ96QE5 360 aaKnown RBP11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 NRTNQ99748 197 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 ARHGAP9Q9BRR9 750 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 CRB3Q9BUF7 120 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 SLC6A16Q9GZN6 736 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 WDR26Q9H7D7 661 aa11.28□□□□□ -0.6
RAB11FIP3-205ENST00000450428 A0A0G2JPF8 293 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 HNRNPCL3B7ZW38 293 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 PRSS44E7EML9 344 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 FAAHO00519 579 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 PRODHO43272 600 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 SLC16A8O95907 504 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 HLA-DQB1P01920 261 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 HNRNPCL4P0DMR1 293 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 ACHEP22303 614 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 PXNP49023 591 aaPredicted RBP11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 TAS2R41P59536 307 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 TMEM255AQ5JRV8 349 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 CPOQ8IVL8 374 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 DOK4Q8TEW6 326 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 FBXO17Q96EF6 278 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 LRIG1Q96JA1 1093 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 RSPO3Q9BXY4 272 aaPredicted RBP11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 C11orf49Q9H6J7 331 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 RDH14Q9HBH5 336 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 ZSCAN32Q9NX65 697 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 PHF11Q9UIL8 331 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 AUP1Q9Y679 476 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 A0A1B0GVI7 797 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 NPIPB15A6NHN6 443 aaPredicted RBP11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 KRBOX1C9JBD0 128 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 GPR31O00270 319 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 ZNF197O14709 1029 aa11.27□□□□□ -0.61
RAB11FIP3-205ENST00000450428 SDC3O75056 442 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms