RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 OTUB1Q96FW1 271 aaPredicted RBP12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 ZNF597Q96LX8 424 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 SLC6A15Q9H2J7 730 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 RMND5AQ9H871 391 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 CCM2LQ9NUG4 571 aaPredicted RBP12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 TAS2R9Q9NYW1 312 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 VAPAQ9P0L0 249 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 ST6GALNAC2Q9UJ37 374 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 NPFFR2Q9Y5X5 522 aa12.54□□□□□ -0.4
PDLIM2-213ENST00000448520 A0A096LPI6 279 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 C15orf38-AP3S2A0A0A6YYH1 394 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 FXYD1O00168 92 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 UPK1AO00322 258 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 TRAPPC6AO75865 159 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 IL2RAP01589 272 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 DNASE1P24855 282 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 GDF1P27539 372 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 UQCRC1P31930 480 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 TRPC1P48995 793 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 ASCL1P50553 236 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 NUDT2P50583 147 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 PRKAG1P54619 331 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 NRG3P56975 720 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 RPS26P62854 115 aaKnown RBP12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 MAP4K2Q12851 820 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 SELPLGQ14242 412 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 DAZAP2Q15038 168 aaPredicted RBP12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 SPDYE7PQ495Y7 208 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 SEM1Q6ZVN7 128 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 DHDDSQ86SQ9 333 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 KIF18BQ86Y91 864 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 TGIF2LYQ8IUE0 185 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 LACC1Q8IV20 430 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 NATD1Q8N6N6 113 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 ZNF441Q8N8Z8 693 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 VPS37AQ8NEZ2 397 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 OR52R1Q8NGF1 315 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 FBXO30Q8TB52 745 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 PNPT1Q8TCS8 783 aaKnown RBP12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 SPPL2AQ8TCT8 520 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 TSPEARQ8WU66 669 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 NRGNQ92686 78 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 FAM120BQ96EK7 910 aaKnown RBP12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 NSL1Q96IY1 281 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 TIMP4Q99727 224 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 SLC35A5Q9BS91 424 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 CLEC4MQ9H2X3 399 aaPredicted RBP12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 EQTNQ9NQ60 294 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 MRGBPQ9NV56 204 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 CRIM1Q9NZV1 1036 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 BCAP29Q9UHQ4 241 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 ZNF639Q9UID6 485 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 PCDHGB4Q9UN71 923 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 PCDHB14Q9Y5E9 798 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 ACANP16112 2415 aa12.53□□□□□ -0.4
PDLIM2-213ENST00000448520 TRBV5-3A0A0A0MS03 114 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 RNF103-CHMP3A0A140T963 221 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 BBIP1A8MTZ0 92 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 KCNH1O95259 989 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 ANP32DO95626 131 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 HPNP05981 417 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 BMP5P22003 454 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 CCT3P49368 545 aaKnown RBP12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 CRYZQ08257 329 aaKnown RBP12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 FUT7Q11130 342 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 STX5Q13190 355 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 TP53BP2Q13625 1128 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 ACSF3Q4G176 576 aaPredicted RBP12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 FLYWCH1Q4VC44 716 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 NHSL2Q5HYW2 709 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 LRIF1Q5T3J3 769 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 C6orf163Q5TEZ5 329 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 VASNQ6EMK4 673 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 RINLQ6ZS11 566 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 C10orf111Q8N326 155 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 DPP10Q8N608 796 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 C17orf47Q8NEP4 570 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 OR7G1Q8NGA0 311 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 PSMA8Q8TAA3 256 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 CMTM5Q96DZ9 223 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 HSPBAP1Q96EW2 488 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 RMND5BQ96G75 393 aaPredicted RBP12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 C16orf58Q96GQ5 468 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 GPATCH1Q9BRR8 931 aaKnown RBP12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 YIPF4Q9BSR8 244 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 ANGPTL4Q9BY76 406 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 SERHL2Q9H4I8 314 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 IKZF5Q9H5V7 419 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 ZCCHC3Q9NUD5 404 aaKnown RBP12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 DDX18Q9NVP1 670 aaKnown RBP12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 DTX4Q9Y2E6 619 aa12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 MAP1AP78559 2803 aaPredicted RBP12.52□□□□□ -0.41
PDLIM2-213ENST00000448520 CD8B2A6NJW9 211 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 A6NNC1 897 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 PLOD2O00469 737 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 EMC8O43402 210 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 NAGAP17050 411 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 UQCRC2P22695 453 aa12.51□□□□□ -0.41
PDLIM2-213ENST00000448520 MASP1P48740 699 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms