RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 MCHR1Q99705 422 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 CLSTN3Q9BQT9 956 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 SCN3AQ9NY46 2000 aa8.5□□□□□ -1.05
NIPBL-202ENST00000448238 ING1Q9UK53 422 aaPredicted RBP8.5□□□□□ -1.05
NIPBL-202ENST00000448238 ABCA10Q8WWZ4 1543 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 MRPL3P09001 348 aaKnown RBP8.49□□□□□ -1.05
NIPBL-202ENST00000448238 CRABP1P29762 137 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 IL2RGP31785 369 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 ACVR1BP36896 505 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 TAS2R45P59539 299 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 RPS13P62277 151 aaKnown RBP8.49□□□□□ -1.05
NIPBL-202ENST00000448238 GLO1Q04760 184 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 EML3Q32P44 896 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 WDR74Q6RFH5 385 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-202ENST00000448238 LRRTM4Q86VH4 590 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 OR4E2Q8NGC2 313 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 IRGQQ8WZA9 623 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 HLA-CQ95604 372 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 ECHDC3Q96DC8 303 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 ANKRD19PQ9H560 264 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 FANCMQ8IYD8 2048 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 KDM5CP41229 1560 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 ADAMTS4O75173 837 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 GLUD2P49448 558 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 CORO6Q6QEF8 472 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 LRRTM1Q86UE6 522 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 FAM156AQ8NDB6 213 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 GPR148Q8TDV2 347 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 GGHQ92820 318 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 ATG4CQ96DT6 458 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 CMTM3Q96MX0 182 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 SLC2A13Q96QE2 648 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 P2RY13Q9BPV8 354 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 LIN7BQ9HAP6 207 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 STXBP5LQ9Y2K9 1186 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 MYO7BQ6PIF6 2116 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 A0A0B4J2A0 478 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 MEIS3P2A8K0S8 358 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 ZNF701M0R085 212 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-202ENST00000448238 ENPP3O14638 875 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 EN2P19622 333 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-202ENST00000448238 HRH2P25021 359 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 HCCSP53701 268 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 RAP1AP62834 184 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 BAXQ07812 192 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 RBMS2Q15434 407 aaKnown RBP8.49□□□□□ -1.05
NIPBL-202ENST00000448238 TTC32Q5I0X7 151 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 GKN2Q86XP6 184 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 SIMC1Q8NDZ2 872 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 PLD4Q96BZ4 506 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 CRB3Q9BUF7 120 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 HOXD1Q9GZZ0 328 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 CARS2Q9HA77 564 aaKnown RBP8.49□□□□□ -1.05
NIPBL-202ENST00000448238 SHPKQ9UHJ6 478 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 CROCC2H7BZ55 1655 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 GABRDO14764 452 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 ADH5P11766 374 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 RARRES1P49788 294 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 NPRL3Q12980 569 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 RNLSQ5VYX0 342 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 LCLAT1Q6UWP7 414 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 MKXQ8IYA7 352 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 OR5D16Q8NGK9 328 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 FCRL1Q96LA6 429 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 PIP5K1AQ99755 562 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 NUDT16L1Q9BRJ7 211 aaKnown RBP8.49□□□□□ -1.05
NIPBL-202ENST00000448238 ACSS1Q9NUB1 689 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-202ENST00000448238 G3V3Y1 287 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 WNT9AO14904 365 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 SHOX2O60902 331 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-202ENST00000448238 SYN1P17600 705 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 ERVFC1P60507 584 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 KCNC3Q14003 757 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 ZNF454Q8N9F8 522 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 NMES1Q9C002 83 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 DEFB129Q9H1M3 183 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 SPACA1Q9HBV2 294 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 SLC17A6Q9P2U8 582 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 GMEB2Q9UKD1 530 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 C5orf52A6NGY3 159 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 SAP18O00422 153 aaKnown RBP8.49□□□□□ -1.05
NIPBL-202ENST00000448238 MMP20O60882 483 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 RASAL1O95294 804 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 UBL4AP11441 157 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 NKPD1Q17RQ9 610 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 C3orf38Q5JPI3 329 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 SFRP4Q6FHJ7 346 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-202ENST00000448238 ADAM5Q6NVV9 412 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 TMIGD1Q6UXZ0 262 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 ZNF620Q6ZNG0 422 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 DGAT2L6Q6ZPD8 337 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 PRSS48Q7RTY5 328 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 TSPYL5Q86VY4 417 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-202ENST00000448238 PXT1Q8NFP0 134 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 HBEGFQ99075 208 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 B3GNT5Q9BYG0 378 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 BARX1Q9HBU1 254 aaPredicted RBP8.49□□□□□ -1.05
NIPBL-202ENST00000448238 SLC23A2Q9UGH3 650 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 DISP2A7MBM2 1401 aa8.49□□□□□ -1.05
NIPBL-202ENST00000448238 CKAP5Q14008 2032 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms