RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 MDC1Q14676 2089 aaKnown RBP17.79■□□□□ 0.44
SDCBP-204ENST00000447182 DUXAA6NLW8 204 aa17.79■□□□□ 0.44
SDCBP-204ENST00000447182 LANCL1O43813 399 aa17.79■□□□□ 0.44
SDCBP-204ENST00000447182 TFPIP10646 304 aa17.79■□□□□ 0.44
SDCBP-204ENST00000447182 NPR2P20594 1047 aa17.79■□□□□ 0.44
SDCBP-204ENST00000447182 CERS1P27544 350 aa17.79■□□□□ 0.44
SDCBP-204ENST00000447182 PITPNBP48739 271 aa17.79■□□□□ 0.44
SDCBP-204ENST00000447182 FRRS1Q6ZNA5 592 aa17.79■□□□□ 0.44
SDCBP-204ENST00000447182 FAM109AQ8N4B1 249 aa17.79■□□□□ 0.44
SDCBP-204ENST00000447182 ING5Q8WYH8 240 aa17.79■□□□□ 0.44
SDCBP-204ENST00000447182 SLC35A4Q96G79 324 aa17.79■□□□□ 0.44
SDCBP-204ENST00000447182 C1QTNF2Q9BXJ5 285 aa17.79■□□□□ 0.44
SDCBP-204ENST00000447182 TEX101Q9BY14 249 aa17.79■□□□□ 0.44
SDCBP-204ENST00000447182 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.79■□□□□ 0.44
SDCBP-204ENST00000447182 SLC6A20Q9NP91 592 aa17.79■□□□□ 0.44
SDCBP-204ENST00000447182 TRIM36Q9NQ86 728 aa17.79■□□□□ 0.44
SDCBP-204ENST00000447182 ENAMQ9NRM1 1142 aa17.79■□□□□ 0.44
SDCBP-204ENST00000447182 IL20RAQ9UHF4 553 aa17.79■□□□□ 0.44
SDCBP-204ENST00000447182 A0A0A6YYJ9 748 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 C7orf66A4D0T2 115 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 FAM183AA6NL82 134 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 C1QTNF3-AMACRE9PGA6 284 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 CHP2O43745 196 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 EIF4EP06730 217 aaKnown RBP17.78■□□□□ 0.44
SDCBP-204ENST00000447182 ZGLP1P0C6A0 271 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 TRAM1Q15629 374 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 PLPP4Q5VZY2 271 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 PLBD1Q6P4A8 553 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 B3GLCTQ6Y288 498 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 TPRA1Q86W33 373 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 ADAMTS15Q8TE58 950 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 MTHFD2LQ9H903 347 aaPredicted RBP17.78■□□□□ 0.44
SDCBP-204ENST00000447182 INPP5EQ9NRR6 644 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 NTMQ9P121 344 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 ZNF780BQ9Y6R6 833 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 PTPRSQ13332 1948 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 IGLON5A6NGN9 336 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 PRICKLE3O43900 615 aaPredicted RBP17.78■□□□□ 0.44
SDCBP-204ENST00000447182 HOXB3P14651 431 aaPredicted RBP17.78■□□□□ 0.44
SDCBP-204ENST00000447182 AHCYP23526 432 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 ACSL1P33121 698 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 BTCP35070 178 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 GALEQ14376 348 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 PUS10Q3MIT2 529 aaKnown RBP17.78■□□□□ 0.44
SDCBP-204ENST00000447182 C1orf53Q5VUE5 145 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 GRASPQ7Z6J2 395 aaPredicted RBP17.78■□□□□ 0.44
SDCBP-204ENST00000447182 OR5H6Q8NGV6 325 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 SCMH1Q96GD3 660 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 MKRN2Q9H000 416 aaKnown RBP17.78■□□□□ 0.44
SDCBP-204ENST00000447182 ABCG5Q9H222 651 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 B3GNT2Q9NY97 397 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 SLC7A7Q9UM01 511 aa17.78■□□□□ 0.44
SDCBP-204ENST00000447182 ANTXRLA6NF34 631 aa17.77■□□□□ 0.44
SDCBP-204ENST00000447182 PLPP2O43688 288 aa17.77■□□□□ 0.44
SDCBP-204ENST00000447182 AGR2O95994 175 aa17.77■□□□□ 0.44
SDCBP-204ENST00000447182 SHC1P29353 583 aa17.77■□□□□ 0.44
SDCBP-204ENST00000447182 ARHGEF6Q15052 776 aa17.77■□□□□ 0.44
SDCBP-204ENST00000447182 CCDC85BQ15834 202 aaPredicted RBP17.77■□□□□ 0.44
SDCBP-204ENST00000447182 GAB4Q2WGN9 574 aa17.77■□□□□ 0.44
SDCBP-204ENST00000447182 SDE2Q6IQ49 451 aa17.77■□□□□ 0.44
SDCBP-204ENST00000447182 SFXN4Q6P4A7 337 aa17.77■□□□□ 0.44
SDCBP-204ENST00000447182 GET4Q7L5D6 327 aaPredicted RBP17.77■□□□□ 0.44
SDCBP-204ENST00000447182 FAM20CQ8IXL6 584 aa17.77■□□□□ 0.44
SDCBP-204ENST00000447182 DNAJC5GQ8N7S2 189 aa17.77■□□□□ 0.44
SDCBP-204ENST00000447182 TMEM99Q8N816 258 aa17.77■□□□□ 0.44
SDCBP-204ENST00000447182 OR5W2Q8NH69 310 aa17.77■□□□□ 0.44
SDCBP-204ENST00000447182 CAPNS2Q96L46 248 aa17.77■□□□□ 0.44
SDCBP-204ENST00000447182 CITED4Q96RK1 184 aa17.77■□□□□ 0.44
SDCBP-204ENST00000447182 PPIL3Q9H2H8 161 aaKnown RBP17.77■□□□□ 0.44
SDCBP-204ENST00000447182 OR52D1Q9H346 318 aa17.77■□□□□ 0.44
SDCBP-204ENST00000447182 STMN3Q9NZ72 180 aa17.77■□□□□ 0.44
SDCBP-204ENST00000447182 DEC1Q9P2X7 70 aa17.77■□□□□ 0.44
SDCBP-204ENST00000447182 CACNG2Q9Y698 323 aa17.77■□□□□ 0.44
SDCBP-204ENST00000447182 TRPM6Q9BX84 2022 aa17.77■□□□□ 0.44
SDCBP-204ENST00000447182 BHLHE40O14503 412 aa17.77■□□□□ 0.43
SDCBP-204ENST00000447182 FABP7O15540 132 aa17.77■□□□□ 0.43
SDCBP-204ENST00000447182 RFPL3O75679 317 aa17.77■□□□□ 0.43
SDCBP-204ENST00000447182 DHFRP00374 187 aa17.77■□□□□ 0.43
SDCBP-204ENST00000447182 HNRNPA1P09651 372 aaKnown RBP eCLIP17.77■□□□□ 0.43
SDCBP-204ENST00000447182 CSF2RAP15509 400 aa17.77■□□□□ 0.43
SDCBP-204ENST00000447182 NUDT1P36639 197 aa17.77■□□□□ 0.43
SDCBP-204ENST00000447182 CEP78Q5JTW2 689 aa17.77■□□□□ 0.43
SDCBP-204ENST00000447182 PRPF38BQ5VTL8 546 aaKnown RBP17.77■□□□□ 0.43
SDCBP-204ENST00000447182 FAM205BPQ63HN1 556 aa17.77■□□□□ 0.43
SDCBP-204ENST00000447182 PYHIN1Q6K0P9 492 aa17.77■□□□□ 0.43
SDCBP-204ENST00000447182 ASB18Q6ZVZ8 466 aa17.77■□□□□ 0.43
SDCBP-204ENST00000447182 SAMD12Q8N8I0 201 aa17.77■□□□□ 0.43
SDCBP-204ENST00000447182 KAT2AQ92830 837 aa17.77■□□□□ 0.43
SDCBP-204ENST00000447182 RSPRY1Q96DX4 576 aa17.77■□□□□ 0.43
SDCBP-204ENST00000447182 MED28Q9H204 178 aa17.77■□□□□ 0.43
SDCBP-204ENST00000447182 GHITMQ9H3K2 345 aa17.77■□□□□ 0.43
SDCBP-204ENST00000447182 LYARQ9NX58 379 aaKnown RBP17.77■□□□□ 0.43
SDCBP-204ENST00000447182 SLC23A1Q9UHI7 598 aa17.77■□□□□ 0.43
SDCBP-204ENST00000447182 KLF15Q9UIH9 416 aa17.77■□□□□ 0.43
SDCBP-204ENST00000447182 RASD1Q9Y272 281 aa17.77■□□□□ 0.43
SDCBP-204ENST00000447182 TBC1D3KA0A087X1G2 549 aa17.76■□□□□ 0.43
SDCBP-204ENST00000447182 TBC1D3BA6NDS4 549 aa17.76■□□□□ 0.43
SDCBP-204ENST00000447182 TBC1D3FA6NER0 549 aaPredicted RBP17.76■□□□□ 0.43
SDCBP-204ENST00000447182 UNC119BA6NIH7 251 aa17.76■□□□□ 0.43
SDCBP-204ENST00000447182 CRYZL1O95825 349 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms