RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 SLC6A13Q9NSD5 602 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 RNF6Q9Y252 685 aa13.46□□□□□ -0.25
HDAC4-204ENST00000446876 CCDC154A6NI56 674 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 SHISA8B8ZZ34 492 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 SCDO00767 359 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 NDUFB5O43674 189 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 NGFRP08138 427 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 HK1P19367 917 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 DCTP40126 519 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 ADH7P40394 386 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 POLR2JP52435 117 aaKnown RBP13.45□□□□□ -0.26
HDAC4-204ENST00000446876 GFRA1P56159 465 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 DSCR4P56555 118 aaPredicted RBP13.45□□□□□ -0.26
HDAC4-204ENST00000446876 B3GALT5-AS1P59052 145 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 SRYQ05066 204 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 C17orf67Q0P5P2 114 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 GTDC1Q4AE62 458 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 ACSF3Q4G176 576 aaPredicted RBP13.45□□□□□ -0.26
HDAC4-204ENST00000446876 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.45□□□□□ -0.26
HDAC4-204ENST00000446876 ZNF787Q6DD87 383 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 XKRXQ6PP77 449 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 ZNF621Q6ZSS3 439 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 SEM1Q6ZVN7 128 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 RNF130Q86XS8 419 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 OR10Q1Q8NGQ4 319 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 RFWD2Q8NHY2 731 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 PNPT1Q8TCS8 783 aaKnown RBP13.45□□□□□ -0.26
HDAC4-204ENST00000446876 RND1Q92730 232 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 VPS33AQ96AX1 596 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 NEURL3Q96EH8 262 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 C1GALT1C1Q96EU7 318 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 SDF2Q99470 211 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 CCDC28BQ9BUN5 200 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 NPHS2Q9NP85 383 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 UBQLN4Q9NRR5 601 aa13.45□□□□□ -0.26
HDAC4-204ENST00000446876 IGLV3-32A0A0A0MS00 114 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 CENPVL1A0A0U1RR11 272 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 FAM90A27PA6NNH2 459 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 OIP5O43482 229 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 EDF1O60869 148 aaKnown RBP13.44□□□□□ -0.26
HDAC4-204ENST00000446876 CLDN14O95500 239 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 ACTL6AO96019 429 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 IL6P05231 212 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 GABRA1P14867 456 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 HPGDP15428 266 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 CD1EP15812 388 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 HTR1EP28566 365 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 LCN1P31025 176 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 GCKP35557 465 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 KHKP50053 298 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 STX1BP61266 288 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 FUT5Q11128 374 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 ART3Q13508 389 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 NDUFAF6Q330K2 333 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 FLYWCH1Q4VC44 716 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 RAET1LQ5VY80 246 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 ARSKQ6UWY0 536 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 PLXDC2Q6UX71 529 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 C16orf62Q7Z3J2 963 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 ZNF614Q8N883 585 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 CHDHQ8NE62 594 aaPredicted RBP13.44□□□□□ -0.26
HDAC4-204ENST00000446876 MIPOL1Q8TD10 442 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 XAGE5Q8WWM1 108 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 NPAS1Q99742 590 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 COQ3Q9NZJ6 369 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 DCTN4Q9UJW0 460 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 VDAC3Q9Y277 283 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 PCDHGB3Q9Y5G1 929 aa13.44□□□□□ -0.26
HDAC4-204ENST00000446876 DOCK7Q96N67 2140 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 A0A0G2JNJ9 132 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 FAM234BA2RU67 622 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 PRAMEF27A3QJZ7 478 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 NPIPB9F8W1W9 429 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 H0Y3Z8 333 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 C19orf84I3L1E1 186 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 RFXANKO14593 260 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 FCMRO60667 390 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 TNFRSF21O75509 655 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 AGAP20933 346 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 LHX2P50458 406 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 SF3A3Q12874 501 aaKnown RBP eCLIP13.43□□□□□ -0.26
HDAC4-204ENST00000446876 GPR68Q15743 365 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 COX20Q5RI15 118 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 SLC2A7Q6PXP3 512 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 HMGN2P46Q86SG4 172 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 FUNDC1Q8IVP5 155 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 PHOSPHO1Q8TCT1 267 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 CA5BP1Q8WTZ4 195 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 TRIB1Q96RU8 372 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 TUBA1CQ9BQE3 449 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 UCK2Q9BZX2 261 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 PTGES2Q9H7Z7 377 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 Q9UFV3 132 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 KCNE5Q9UJ90 142 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 MKLN1Q9UL63 735 aa13.43□□□□□ -0.26
HDAC4-204ENST00000446876 MRPS18CQ9Y3D5 142 aaKnown RBP13.43□□□□□ -0.26
HDAC4-204ENST00000446876 HCFC1P51610 2035 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 HEATR5AQ86XA9 2040 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 A0A1W2PQD3 144 aa13.42□□□□□ -0.26
HDAC4-204ENST00000446876 NKX2-6A6NCS4 301 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms