RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 J3KTA2 159 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 GTPBP1O00178 669 aaKnown RBP6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 SCDO00767 359 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 PCDH17O14917 1159 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 TO15178 435 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 ACOX3O15254 700 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 ASNA1O43681 348 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 TPST2O60704 377 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 ADAM11O75078 769 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 GMNNO75496 209 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 SLC25A12O75746 678 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 NEURL1O76050 574 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 PDE9AO76083 593 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 ANGPTL1O95841 491 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 NUDT14O95848 222 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 EPPINO95925 133 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 IL7RP16871 459 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 HTR1EP28566 365 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 KDELR2P33947 212 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 CASRP41180 1078 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 PTGDSP41222 190 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 CYB561P49447 251 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 HLCSP50747 726 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 DCAF7P61962 342 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 PPP1R8Q12972 351 aaKnown RBP6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 MFAP5Q13361 173 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 FLOT2Q14254 428 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 TOMM34Q15785 309 aaPredicted RBP6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 DUSP7Q16829 419 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 MRPL2Q5T653 305 aaKnown RBP6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 JMJD6Q6NYC1 403 aaPredicted RBP6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 ZCCHC12Q6PEW1 402 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 OPN5Q6U736 354 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 CBLN3Q6UW01 205 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 DEF8Q6ZN54 512 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 LRRC74BQ6ZQY2 392 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 FKBP9P1Q75LS8 142 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 GALNTL5Q7Z4T8 443 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 DHFR2Q86XF0 187 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 MEX3DQ86XN8 651 aaKnown RBP6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 P3H2Q8IVL5 708 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 EXD3Q8N9H8 876 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 KDF1Q8NAX2 398 aaPredicted RBP6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 POGLUT1Q8NBL1 392 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 ATP6V1C2Q8NEY4 427 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 OR8K3Q8NH51 312 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 BBS10Q8TAM1 723 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 SPPL2AQ8TCT8 520 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 HOXB13Q92826 284 aaPredicted RBP6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 HSPBAP1Q96EW2 488 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 RSRC1Q96IZ7 334 aaKnown RBP6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 HSH2DQ96JZ2 352 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 LRGUKQ96M69 825 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 NSMCE2Q96MF7 247 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 GNRHR2Q96P88 292 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 DOHHQ9BU89 302 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 G6PC3Q9BUM1 346 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 DSN1Q9H410 356 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 TMEM38AQ9H6F2 299 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 TUBA8Q9NY65 449 aaPredicted RBP6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 ABI3Q9P2A4 366 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 TNFRSF10DQ9UBN6 386 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 TEKT2Q9UIF3 430 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 FBXL2Q9UKC9 423 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 CNOT11Q9UKZ1 510 aaKnown RBP6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 AURKCQ9UQB9 309 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 RPH3AQ9Y2J0 694 aaPredicted RBP6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 SH3GLB1Q9Y371 365 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 CHST2Q9Y4C5 530 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 PCDHGB3Q9Y5G1 929 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 CHCHD2Q9Y6H1 151 aaPredicted RBP6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 MGAQ8IWI9 3026 aa6.92□□□□□ -1.3
SF3A3P1-201ENST00000446317 A0A0G2JPF8 293 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 OR5H15A6NDH6 313 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 SERINC4A6NH21 518 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 OR6C70A6NIJ9 312 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 CPSF4LA6NMK7 179 aaKnown RBP6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 TMEM229AB2RXF0 380 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 HNRNPCL2B2RXH8 293 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 HNRNPCL3B7ZW38 293 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 MKRN2OSH3BPM6 223 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 ACOT8O14734 319 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 HCRTR2O43614 444 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 NDUFB5O43674 189 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 FADS1O60427 444 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 HNRNPCL1O60812 293 aaKnown RBP6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 ENTPD5O75356 428 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 MFN2O95140 757 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 AGR2O95994 175 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 CSTAP01040 98 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 P04436 131 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 CELA3AP09093 270 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 RFPL3SP0C7P2 107 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 PABPC4LP0CB38 370 aaKnown RBP6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 HNRNPCL4P0DMR1 293 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 BMP2P12643 396 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 HSD17B1P14061 328 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 CD247P20963 164 aa6.91□□□□□ -1.3
SF3A3P1-201ENST00000446317 PAX7P23759 505 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms