RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 DMRTC2Q8IXT2 367 aaPredicted RBP13.35□□□□□ -0.27
USE1-202ENST00000445667 UBQLNLQ8IYU4 475 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 RELL2Q8NC24 303 aaPredicted RBP13.35□□□□□ -0.27
USE1-202ENST00000445667 OR8J2Q8NGG1 315 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 OR5D16Q8NGK9 328 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 OR4A15Q8NGL6 344 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 MBD3L2Q8NHZ7 208 aaPredicted RBP13.35□□□□□ -0.27
USE1-202ENST00000445667 MOAP1Q96BY2 351 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 C1GALT1C1Q96EU7 318 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 TEX37Q96LM6 180 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 OR7D2Q96RA2 312 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 TREX2Q9BQ50 279 aaPredicted RBP13.35□□□□□ -0.27
USE1-202ENST00000445667 UBQLN4Q9NRR5 601 aa13.35□□□□□ -0.27
USE1-202ENST00000445667 TEX15Q9BXT5 2789 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 HCFC1P51610 2035 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 IGLV3-32A0A0A0MS00 114 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 PRSS51A0A1B0GVH4 220 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 OR2M5A3KFT3 312 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 TRPC5OSA6NMA1 111 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 C9JVG2 144 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 H0YC42 278 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 RNASET2O00584 256 aaKnown RBP13.34□□□□□ -0.27
USE1-202ENST00000445667 DVL2O14641 736 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 NGFRP08138 427 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 PEPDP12955 493 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 ZNF708P17019 499 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 MATN1P21941 496 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 RNF144AP50876 292 aaPredicted RBP13.34□□□□□ -0.27
USE1-202ENST00000445667 DGKQP52824 942 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 CASP9P55211 416 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 TPD52P55327 224 aaPredicted RBP13.34□□□□□ -0.27
USE1-202ENST00000445667 UFM1P61960 85 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 OCRLQ01968 901 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 GANABQ14697 944 aaKnown RBP13.34□□□□□ -0.27
USE1-202ENST00000445667 SPANXN4Q5MJ08 99 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 DCST2Q5T1A1 773 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 OGFOD2Q6N063 350 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 ADGRE4PQ86SQ3 457 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 LRRC34Q8IZ02 419 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 RAB3IL1Q8TBN0 382 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 ZNF75CPQ92670 426 aaPredicted RBP13.34□□□□□ -0.27
USE1-202ENST00000445667 SH3YL1Q96HL8 342 aaPredicted RBP13.34□□□□□ -0.27
USE1-202ENST00000445667 KLHDC3Q9BQ90 382 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 SERHL2Q9H4I8 314 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 AIG1Q9NVV5 245 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 ZNF629Q9UEG4 869 aaPredicted RBP13.34□□□□□ -0.27
USE1-202ENST00000445667 PCDHGB4Q9UN71 923 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 VDAC3Q9Y277 283 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 FBN2P35556 2912 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 PCNX3Q9H6A9 2034 aa13.34□□□□□ -0.27
USE1-202ENST00000445667 NOTCH2Q04721 2471 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 H3BML4 177 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 SCDO00767 359 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 KRT16P08779 473 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 POU3F2P20265 443 aaPredicted RBP13.33□□□□□ -0.28
USE1-202ENST00000445667 ATP6V1C1P21283 382 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 CTSSP25774 331 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 IL12AP29459 219 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 LCN1P31025 176 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 S100A3P33764 101 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 SUCLG1P53597 346 aaKnown RBP13.33□□□□□ -0.28
USE1-202ENST00000445667 CLNS1AP54105 237 aaKnown RBP13.33□□□□□ -0.28
USE1-202ENST00000445667 CLDN15P56746 228 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 KRTAP10-9P60411 292 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 FOXF2Q12947 444 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 CD226Q15762 336 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 BCL2A1Q16548 175 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 FAM174BQ3ZCQ3 159 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 SLC9B1Q4ZJI4 515 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 ANXA8L1Q5VT79 327 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 NXNQ6DKJ4 435 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 BHLHB9Q6PI77 547 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 SPATA19Q7Z5L4 167 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 TESCQ96BS2 214 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 NPAS1Q99742 590 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 PIGQQ9BRB3 760 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 CLCF1Q9UBD9 225 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 GPR45Q9Y5Y3 372 aa13.33□□□□□ -0.28
USE1-202ENST00000445667 NUP214P35658 2090 aaPredicted RBP13.33□□□□□ -0.28
USE1-202ENST00000445667 PKDREJQ9NTG1 2253 aa13.32□□□□□ -0.28
USE1-202ENST00000445667 RNF103-CHMP3A0A140T963 221 aa13.32□□□□□ -0.28
USE1-202ENST00000445667 E9PBE3 544 aa13.32□□□□□ -0.28
USE1-202ENST00000445667 SLCO1B7G3V0H7 640 aa13.32□□□□□ -0.28
USE1-202ENST00000445667 SEC14L5O43304 696 aa13.32□□□□□ -0.28
USE1-202ENST00000445667 TGM6O95932 706 aa13.32□□□□□ -0.28
USE1-202ENST00000445667 TMIGD3P0DMS9 266 aaPredicted RBP13.32□□□□□ -0.28
USE1-202ENST00000445667 SSTR2P30874 369 aa13.32□□□□□ -0.28
USE1-202ENST00000445667 UQCRC1P31930 480 aa13.32□□□□□ -0.28
USE1-202ENST00000445667 CLDN20P56880 219 aa13.32□□□□□ -0.28
USE1-202ENST00000445667 TLE4Q04727 773 aa13.32□□□□□ -0.28
USE1-202ENST00000445667 GLYR1Q49A26 553 aaPredicted RBP13.32□□□□□ -0.28
USE1-202ENST00000445667 TTMPQ5BVD1 217 aa13.32□□□□□ -0.28
USE1-202ENST00000445667 CHMP1BQ7LBR1 199 aa13.32□□□□□ -0.28
USE1-202ENST00000445667 OLIG3Q7RTU3 272 aa13.32□□□□□ -0.28
USE1-202ENST00000445667 MAVSQ7Z434 540 aa13.32□□□□□ -0.28
USE1-202ENST00000445667 GCNT2Q8N0V5 402 aa13.32□□□□□ -0.28
USE1-202ENST00000445667 VPS37AQ8NEZ2 397 aa13.32□□□□□ -0.28
USE1-202ENST00000445667 PHOSPHO1Q8TCT1 267 aa13.32□□□□□ -0.28
USE1-202ENST00000445667 SMPDL3BQ92485 455 aa13.32□□□□□ -0.28
USE1-202ENST00000445667 WNT2BQ93097 391 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms