RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 RNF138Q8WVD3 245 aa14.46□□□□□ -0.09
USP40-206ENST00000443711 ZG16BQ96DA0 208 aa14.46□□□□□ -0.09
USP40-206ENST00000443711 SCMH1Q96GD3 660 aa14.46□□□□□ -0.09
USP40-206ENST00000443711 HHATLQ9HCP6 504 aa14.46□□□□□ -0.09
USP40-206ENST00000443711 ZNF71Q9NQZ8 489 aaPredicted RBP14.46□□□□□ -0.09
USP40-206ENST00000443711 SDHAF3Q9NRP4 125 aa14.46□□□□□ -0.09
USP40-206ENST00000443711 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.46□□□□□ -0.09
USP40-206ENST00000443711 KCNE5Q9UJ90 142 aa14.46□□□□□ -0.09
USP40-206ENST00000443711 IFT52Q9Y366 437 aa14.46□□□□□ -0.09
USP40-206ENST00000443711 DTNAQ9Y4J8 743 aa14.46□□□□□ -0.09
USP40-206ENST00000443711 PCDHGB6Q9Y5F9 930 aa14.46□□□□□ -0.09
USP40-206ENST00000443711 GPC6Q9Y625 555 aaPredicted RBP14.46□□□□□ -0.09
USP40-206ENST00000443711 M0QX08 132 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 SCO2O43819 266 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 NME2P1O60361 137 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 GCM2O75603 506 aaPredicted RBP14.45□□□□□ -0.1
USP40-206ENST00000443711 SNX4O95219 450 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 GGT1P19440 569 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 RPS4Y1P22090 263 aaKnown RBP14.45□□□□□ -0.1
USP40-206ENST00000443711 NME2P22392 152 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 KDELR2P33947 212 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 CD97P48960 835 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 LARS2Q15031 903 aaKnown RBP14.45□□□□□ -0.1
USP40-206ENST00000443711 MAPK14Q16539 360 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 PRAMEF20Q5VT98 475 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 GLYATQ6IB77 296 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 APOOLQ6UXV4 268 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 Q6ZS92 163 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 ASRGL1Q7L266 308 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 MARCH3Q86UD3 253 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 PTRH1Q86Y79 214 aaKnown RBP14.45□□□□□ -0.1
USP40-206ENST00000443711 RBMXL3Q8N7X1 1067 aaKnown RBP14.45□□□□□ -0.1
USP40-206ENST00000443711 FAM156AQ8NDB6 213 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 SLC26A7Q8TE54 656 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 WDR60Q8WVS4 1066 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 FIG4Q92562 907 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 WBP1Q96G27 269 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 CLPTM1LQ96KA5 538 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 FAM173AQ9BQD7 235 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 OSBPL11Q9BXB4 747 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 QRSL1Q9H0R6 528 aaKnown RBP14.45□□□□□ -0.1
USP40-206ENST00000443711 MMADHCQ9H3L0 296 aaPredicted RBP14.45□□□□□ -0.1
USP40-206ENST00000443711 KLHL1Q9NR64 748 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 EGFL7Q9UHF1 273 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 CSAG2Q9Y5P2 127 aa14.45□□□□□ -0.1
USP40-206ENST00000443711 CACNA1BQ00975 2339 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 SERINC4A6NH21 518 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 KLRC4-KLRK1H3BQV0 150 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 GTPBP1O00178 669 aaKnown RBP14.44□□□□□ -0.1
USP40-206ENST00000443711 NDUFB5O43674 189 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 PEX1O43933 1283 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 PDE5AO76074 875 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 ANGPTL1O95841 491 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 THBS1P07996 1170 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 PABPC4LP0CB38 370 aaKnown RBP14.44□□□□□ -0.1
USP40-206ENST00000443711 MSX2P35548 267 aaPredicted RBP14.44□□□□□ -0.1
USP40-206ENST00000443711 ADH7P40394 386 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 PTGDSP41222 190 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 KCNJ2P63252 427 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 KCNJ10P78508 379 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 C17orf67Q0P5P2 114 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 TRIM25Q14258 630 aaKnown RBP14.44□□□□□ -0.1
USP40-206ENST00000443711 ZNF169Q14929 603 aaPredicted RBP14.44□□□□□ -0.1
USP40-206ENST00000443711 FXNQ16595 210 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 ZSWIM7Q19AV6 140 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 LIN52Q52LA3 116 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 ZNF311Q5JNZ3 666 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 BICRALQ6AI39 1079 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 PGM2L1Q6PCE3 622 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 GALNTL5Q7Z4T8 443 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 HMGN2P46Q86SG4 172 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 PACS2Q86VP3 889 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 VRK2Q86Y07 508 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 ARMC8Q8IUR7 673 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 MISPQ8IVT2 679 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 CMIPQ8IY22 773 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 BHLHE22Q8NFJ8 381 aaPredicted RBP14.44□□□□□ -0.1
USP40-206ENST00000443711 NTNG2Q96CW9 530 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 DOHHQ9BU89 302 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 MFRPQ9BY79 579 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 HES7Q9BYE0 225 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 MUC13Q9H3R2 512 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 ARMC7Q9H6L4 198 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 PROK2Q9HC23 129 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 SEC14L3Q9UDX4 400 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 MAGEL2Q9UJ55 1249 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 B3GNT3Q9Y2A9 372 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 SNX13Q9Y5W8 968 aa14.44□□□□□ -0.1
USP40-206ENST00000443711 ZZEF1O43149 2961 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 PIEZO2Q9H5I5 2752 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 CFAP47Q6ZTR5 3102 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 CENPVL1A0A0U1RR11 272 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 G3V3Y1 287 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 MFN2O95140 757 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 NID1P14543 1247 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 NCK1P16333 377 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 DNASE1L1P49184 302 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 GAS1P54826 345 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 FGFBP1Q14512 234 aa14.43□□□□□ -0.1
USP40-206ENST00000443711 EIF3MQ7L2H7 374 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms