RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 RNF165Q6ZSG1 346 aa10.6□□□□□ -0.71
TTC28-203ENST00000442232 SH2D5Q6ZV89 423 aa10.6□□□□□ -0.71
TTC28-203ENST00000442232 BTLAQ7Z6A9 289 aa10.6□□□□□ -0.71
TTC28-203ENST00000442232 P3H2Q8IVL5 708 aa10.6□□□□□ -0.71
TTC28-203ENST00000442232 RIBC1Q8N443 379 aaPredicted RBP10.6□□□□□ -0.71
TTC28-203ENST00000442232 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.6□□□□□ -0.71
TTC28-203ENST00000442232 PIGTQ969N2 578 aa10.6□□□□□ -0.71
TTC28-203ENST00000442232 ZBTB8AQ96BR9 441 aa10.6□□□□□ -0.71
TTC28-203ENST00000442232 PIK3IP1Q96FE7 263 aa10.6□□□□□ -0.71
TTC28-203ENST00000442232 APOPT1Q96IL0 206 aa10.6□□□□□ -0.71
TTC28-203ENST00000442232 GATA5Q9BWX5 397 aaPredicted RBP10.6□□□□□ -0.71
TTC28-203ENST00000442232 C12orf65Q9H3J6 166 aaKnown RBP10.6□□□□□ -0.71
TTC28-203ENST00000442232 RNF122Q9H9V4 155 aa10.6□□□□□ -0.71
TTC28-203ENST00000442232 CCL27Q9Y4X3 112 aa10.6□□□□□ -0.71
TTC28-203ENST00000442232 ACANP16112 2415 aa10.6□□□□□ -0.71
TTC28-203ENST00000442232 LSM1O15116 133 aaKnown RBP10.59□□□□□ -0.71
TTC28-203ENST00000442232 CTIFO43310 598 aaKnown RBP10.59□□□□□ -0.71
TTC28-203ENST00000442232 SMPD2O60906 423 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 IGKV1D-16P01601 117 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 NGFRP08138 427 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 KRT16P08779 473 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 CD53P19397 219 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 TBXA2RP21731 343 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 CRYGSP22914 178 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 ADSLP30566 484 aaPredicted RBP10.59□□□□□ -0.71
TTC28-203ENST00000442232 KIR2DL2P43627 348 aaPredicted RBP10.59□□□□□ -0.71
TTC28-203ENST00000442232 POU6F2P78424 691 aaPredicted RBP10.59□□□□□ -0.71
TTC28-203ENST00000442232 NKX6-1P78426 367 aaPredicted RBP10.59□□□□□ -0.71
TTC28-203ENST00000442232 SLC18A2Q05940 514 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 IFFO1Q0D2I5 559 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 PDE7AQ13946 482 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 KIAA0040Q15053 153 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.59□□□□□ -0.71
TTC28-203ENST00000442232 EXOC3L2Q2M3D2 409 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 KRTAP21-3Q3LHN1 58 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 SPDYE7PQ495Y7 208 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 ZNF385BQ569K4 471 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 KANK2Q63ZY3 851 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 MFSD12Q6NUT3 480 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 FIGNL1Q6PIW4 674 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 ZNF474Q6S9Z5 364 aaPredicted RBP10.59□□□□□ -0.71
TTC28-203ENST00000442232 FAM214BQ7L5A3 538 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 GALNT10Q86SR1 603 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 BIVMQ86UB2 503 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 STK32CQ86UX6 486 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 EXOC3L1Q86VI1 746 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 GTPBP8Q8N3Z3 284 aaPredicted RBP10.59□□□□□ -0.71
TTC28-203ENST00000442232 GATSQ8NAP1 163 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 ZNF527Q8NB42 609 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 OR6K3Q8NGY3 331 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 OR2T11Q8NH01 316 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 TWIST2Q8WVJ9 160 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 CAVIN3Q969G5 261 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 ZC3HAV1LQ96H79 300 aaKnown RBP10.59□□□□□ -0.71
TTC28-203ENST00000442232 SH3YL1Q96HL8 342 aaPredicted RBP10.59□□□□□ -0.71
TTC28-203ENST00000442232 REXO5Q96IC2 774 aaKnown RBP10.59□□□□□ -0.71
TTC28-203ENST00000442232 GMPPAQ96IJ6 420 aaPredicted RBP10.59□□□□□ -0.71
TTC28-203ENST00000442232 FCRL1Q96LA6 429 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 PPP3R2Q96LZ3 170 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 WFIKKN1Q96NZ8 548 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 CCL19Q99731 98 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 RTN4RQ9BZR6 473 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 KLHL4Q9C0H6 718 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 UBTD1Q9HAC8 227 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 UBQLN4Q9NRR5 601 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 ZCCHC3Q9NUD5 404 aaKnown RBP10.59□□□□□ -0.71
TTC28-203ENST00000442232 ATAD3AQ9NVI7 634 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 MKS1Q9NXB0 559 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 C6orf203Q9P0P8 240 aaPredicted RBP10.59□□□□□ -0.71
TTC28-203ENST00000442232 BAIAP2L1Q9UHR4 511 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 SNX8Q9Y5X2 465 aa10.59□□□□□ -0.71
TTC28-203ENST00000442232 ZNF469Q96JG9 3925 aaPredicted RBP10.58□□□□□ -0.72
TTC28-203ENST00000442232 SHISA8B8ZZ34 492 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 H3BNH8 94 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 PIP5K1BO14986 540 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 NPHS1O60500 1241 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 KCNK2O95069 426 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 ACP2P11117 423 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 BCKDHAP12694 445 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 PPP3CBP16298 524 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 ATP6AP1LQ52LC2 224 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 GTF2IRD2BQ6EKJ0 949 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 Q6ZSR9 355 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 ZNF550Q7Z398 422 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 GTF2IRD2Q86UP8 949 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 NATD1Q8N6N6 113 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 ZNF610Q8N9Z0 462 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 WFDC11Q8NEX6 87 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 OR10D3Q8NH80 312 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 ACTRT2Q8TDY3 377 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 POM121Q96HA1 1249 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 C18orf12Q96KH6 178 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 PRPF18Q99633 342 aaKnown RBP10.58□□□□□ -0.72
TTC28-203ENST00000442232 BTBD2Q9BX70 525 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 ZNF395Q9H8N7 513 aaPredicted RBP10.58□□□□□ -0.72
TTC28-203ENST00000442232 TIGARQ9NQ88 270 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 GLRX2Q9NS18 164 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 NTMQ9P121 344 aa10.58□□□□□ -0.72
TTC28-203ENST00000442232 FAF1Q9UNN5 650 aaPredicted RBP10.58□□□□□ -0.72
TTC28-203ENST00000442232 TRAF6Q9Y4K3 522 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms