RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 ZNF99A8MXY4 864 aaPredicted RBP5.58□□□□□ -1.52
VPS50-205ENST00000441602 IL33O95760 270 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 RECKO95980 971 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 GP1BAP07359 652 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 BMP7P18075 431 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 CHMP24386 653 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 NUBP1P53384 320 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 SNRPGP62308 76 aaKnown RBP5.58□□□□□ -1.52
VPS50-205ENST00000441602 SNRPNP63162 240 aaKnown RBP5.58□□□□□ -1.52
VPS50-205ENST00000441602 EFR3AQ14156 821 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 GINS1Q14691 196 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 PTGES3Q15185 160 aaKnown RBP5.58□□□□□ -1.52
VPS50-205ENST00000441602 OR1Q1Q15612 314 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 CTU2Q2VPK5 515 aaKnown RBP5.58□□□□□ -1.52
VPS50-205ENST00000441602 CNPY1Q3B7I2 92 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 PDZK1Q5T2W1 519 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 AP1ARQ63HQ0 302 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 ZNF770Q6IQ21 691 aaPredicted RBP5.58□□□□□ -1.52
VPS50-205ENST00000441602 PRR23CQ6ZRP0 262 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 HMGN2P46Q86SG4 172 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 PRSS58Q8IYP2 241 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 MAML2Q8IZL2 1156 aaPredicted RBP5.58□□□□□ -1.52
VPS50-205ENST00000441602 SLC34A3Q8N130 599 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 CLDN22Q8N7P3 220 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 ZBTB44Q8NCP5 570 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 OR5L2Q8NGL0 311 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 SLC2A12Q8TD20 617 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 DNAJA4Q8WW22 397 aaPredicted RBP5.58□□□□□ -1.52
VPS50-205ENST00000441602 RACGAP1Q9H0H5 632 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 DUSP21Q9H596 190 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 C11orf16Q9NQ32 467 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 SEMA4GQ9NTN9 838 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 RYDENQ9NUL5 291 aaKnown RBP5.58□□□□□ -1.52
VPS50-205ENST00000441602 RLIMQ9NVW2 624 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 H2AFY2Q9P0M6 372 aaPredicted RBP5.58□□□□□ -1.52
VPS50-205ENST00000441602 BAIAP2Q9UQB8 552 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 A0A087WUU8 490 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 UNC119BA6NIH7 251 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 D6RAR5 112 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 FRS3O43559 492 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 TPST2O60704 377 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 TRMUO75648 421 aaKnown RBP5.58□□□□□ -1.52
VPS50-205ENST00000441602 AVPR2P30518 371 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 GCGRP47871 477 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 PSG6Q00889 435 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 E2F1Q01094 437 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 RHAGQ02094 409 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 PLCXD2Q0VAA5 305 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 FGFBP1Q14512 234 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 ANGPT1Q15389 498 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 SLC27A4Q6P1M0 643 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 CCDC81Q6ZN84 652 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 ENTHD1Q8IYW4 607 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 BCORP1Q8N888 145 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 ZNF615Q8N8J6 731 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 OR9Q1Q8NGQ5 310 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 RHBDD1Q8TEB9 315 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 TSLPQ969D9 159 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 NECAB3Q96P71 396 aaPredicted RBP5.58□□□□□ -1.52
VPS50-205ENST00000441602 LPAR4Q99677 370 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 SLC7A7Q9UM01 511 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 CDH10Q9Y6N8 788 aa5.58□□□□□ -1.52
VPS50-205ENST00000441602 NPIPA5A0A0B4J1W7 369 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 A0A1W2PQM1 296 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 FAM86C2PA6NEL3 165 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 NPIPA7E9PJI5 369 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 CHP2O43745 196 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 HCN1O60741 890 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 ALOX12BO75342 701 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 IGHEP01854 428 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 NPIPA8P0DM63 369 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 FGF5P12034 268 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 IFI30P13284 250 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 MMP11P24347 488 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 SEC23BQ15437 767 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 SNAPC1Q16533 368 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 KLHL22Q53GT1 634 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 C12orf73Q69YU5 71 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 LAIR1Q6GTX8 287 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 DGAT2L6Q6ZPD8 337 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 AHSA2Q719I0 299 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 OVCH1Q7RTY7 1134 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 SPARTQ8N0X7 666 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 TMCO5AQ8N6Q1 288 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 RCBTB1Q8NDN9 531 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 STT3BQ8TCJ2 826 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.57□□□□□ -1.52
VPS50-205ENST00000441602 TMEM239Q8WW34 195 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 RFKQ969G6 155 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 FUZQ9BT04 418 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 POLDIP3Q9BY77 421 aaKnown RBP5.57□□□□□ -1.52
VPS50-205ENST00000441602 MED17Q9NVC6 651 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 CACNA1IQ9P0X4 2223 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 IGLV3-12A0A075B6K2 115 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 CLCA1A8K7I4 914 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 TGFBR3LH3BV60 316 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 MAN1A2O60476 641 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 PNMTP11086 282 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 PSMB9P28065 219 aa5.57□□□□□ -1.52
VPS50-205ENST00000441602 GSTT1P30711 240 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms