RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 SLC9A5Q14940 896 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 ST3GAL2Q16842 350 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 ODF4Q2M2E3 257 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 GLRX5Q86SX6 157 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 SLC51BQ86UW2 128 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 FAM129CQ86XR2 697 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 SIRT6Q8N6T7 355 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 OR6K6Q8NGW6 343 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 OR4C6Q8NH72 309 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 ST8SIA4Q92187 359 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 OTUB2Q96DC9 234 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 CD180Q99467 661 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 TMEM175Q9BSA9 504 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 GLIPR2Q9H4G4 154 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 FZD3Q9NPG1 666 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 SLC35C2Q9NQQ7 365 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 TESQ9UGI8 421 aaKnown RBP8.48□□□□□ -1.05
COPB1-202ENST00000439561 SLC7A7Q9UM01 511 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 SCML1Q9UN30 329 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 COPS3Q9UNS2 423 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 GON4LQ3T8J9 2241 aa8.48□□□□□ -1.05
COPB1-202ENST00000439561 K7ESM1 405 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 SHOXO15266 292 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 RPP14O95059 124 aaKnown RBP8.47□□□□□ -1.05
COPB1-202ENST00000439561 SPDEFO95238 335 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 SIX6O95475 246 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 SLC35G4P0C7Q5 338 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 GKN3PP0CG01 181 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 TYRP14679 529 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 RPL4P36578 427 aaKnown RBP8.47□□□□□ -1.05
COPB1-202ENST00000439561 MC3RP41968 323 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 STAT5AP42229 794 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 RPL35P42766 123 aaKnown RBP8.47□□□□□ -1.05
COPB1-202ENST00000439561 TSPAN31Q12999 210 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 LGALSLQ3ZCW2 172 aaPredicted RBP8.47□□□□□ -1.05
COPB1-202ENST00000439561 ENTPD8Q5MY95 495 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 CD276Q5ZPR3 534 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 SLC8B1Q6J4K2 584 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 TMEM65Q6PI78 240 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 FAM198BQ6UWH4 519 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 COMTD1Q86VU5 262 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 AMER3Q8N944 861 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 OR2A12Q8NGT7 310 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 OR4Q3Q8NH05 313 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 ING5Q8WYH8 240 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 HHIPQ96QV1 700 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 GDF15Q99988 308 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 ADAP2Q9NPF8 381 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 CD93Q9NPY3 652 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 SCP2D1Q9UJQ7 156 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 GNG8Q9UK08 70 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 FKBP7Q9Y680 259 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 ZNF780BQ9Y6R6 833 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 ARID1AO14497 2285 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 DSPPQ9NZW4 1301 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 IGLV3-16A0A075B6K0 115 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 A0A1B0GVI7 797 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 TRABD2BA6NFA1 517 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 PCDH8O95206 1070 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 RECKO95980 971 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 PCCBP05166 539 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 RBMS1P29558 406 aaKnown RBP8.47□□□□□ -1.05
COPB1-202ENST00000439561 IRS1P35568 1242 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 GDNFP39905 211 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 PRLHRP49683 370 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 CLCNKAP51800 687 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 LIMK1P53667 647 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 HCCSP53701 268 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 OR12D2P58182 307 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 E2F1Q01094 437 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 FGL2Q14314 439 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 LY6G5CQ5SRR4 150 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 OR4N5Q8IXE1 308 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 SLC44A3Q8N4M1 653 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 C10orf53Q8N6V4 93 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 FAM181AQ8N9Y4 354 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 PXYLP1Q8TE99 480 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 TTC9Q92623 222 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 SLC41A3Q96GZ6 507 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 ORAI3Q9BRQ5 295 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 AIFM2Q9BRQ8 373 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 TRAF4Q9BUZ4 470 aaPredicted RBP8.47□□□□□ -1.05
COPB1-202ENST00000439561 ERVMER34-1Q9H9K5 563 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 FGF20Q9NP95 211 aaPredicted RBP8.47□□□□□ -1.05
COPB1-202ENST00000439561 SDHAF2Q9NX18 166 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 ELF5Q9UKW6 265 aaPredicted RBP8.47□□□□□ -1.05
COPB1-202ENST00000439561 ABT1Q9ULW3 272 aaKnown RBP8.47□□□□□ -1.05
COPB1-202ENST00000439561 WNT6Q9Y6F9 365 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 KCNE3Q9Y6H6 103 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 CHD5Q8TDI0 1954 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 NPIPA5A0A0B4J1W7 369 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 SLC5A10A0PJK1 596 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 NPIPA7E9PJI5 369 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 ADAMTS4O75173 837 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 NPIPA8P0DM63 369 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 PTHLHP12272 177 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 IL32P24001 234 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 EDNRAP25101 427 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 PSMB10P40306 273 aa8.47□□□□□ -1.05
COPB1-202ENST00000439561 SOX2P48431 317 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms