RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 ZNF142P52746 1687 aaPredicted RBP2.65□□□□□ -1.99
VPS41-207ENST00000439468 XIRP1Q702N8 1843 aaKnown RBP2.65□□□□□ -1.99
VPS41-207ENST00000439468 RICTORQ6R327 1708 aa2.65□□□□□ -1.99
VPS41-207ENST00000439468 CCDC7Q96M83 1385 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 CAMTA1Q9Y6Y1 1673 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 ESYT2A0FGR8 921 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 PHOX2AO14813 284 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 CLDN3O15551 220 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 BCL2L11O43521 198 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 JAK2O60674 1132 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 PEX11AO75192 247 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 NEBLO76041 1014 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 TM7SF2O76062 418 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 GJB5O95377 273 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 GIG44P09565 113 aaPredicted RBP2.64□□□□□ -1.99
VPS41-207ENST00000439468 CALCBP10092 127 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 THRBP10828 461 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 PGAM2P15259 253 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 FASP25445 335 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 BDKRB1P46663 353 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 PUDPQ08623 228 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 ELP6Q0PNE2 266 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 DPYSL3Q14195 570 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 TTC31Q49AM3 519 aaPredicted RBP2.64□□□□□ -1.99
VPS41-207ENST00000439468 ZNF311Q5JNZ3 666 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 LGSNQ5TDP6 509 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 CGB2Q6NT52 195 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 STAC2Q6ZMT1 411 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 HSD11B1LQ7Z5J1 315 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 LINC01561Q8N1V8 128 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 OR2T34Q8NGX1 318 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 VN1R17PQ8TDU5 208 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 ARNTL2Q8WYA1 636 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 CASD1Q96PB1 797 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 ZNF416Q9BWM5 594 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 COMMD4Q9H0A8 199 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 IKZF5Q9H5V7 419 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 MEAF6Q9HAF1 191 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.64□□□□□ -1.99
VPS41-207ENST00000439468 PRR34Q9NV39 138 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 LAMP5Q9UJQ1 280 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 BLOC1S6Q9UL45 172 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 NAALAD2Q9Y3Q0 740 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 U3KQV3 271 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 SOGA1O94964 1423 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 GRIN2DO15399 1336 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 CAMSAP1Q5T5Y3 1602 aa2.64□□□□□ -1.99
VPS41-207ENST00000439468 RNF17Q9BXT8 1623 aaKnown RBP2.64□□□□□ -1.99
VPS41-207ENST00000439468 ARHGEF12Q9NZN5 1544 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 USP6P35125 1406 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 SAGE2PA6NJ88 616 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 STX7O15400 261 aaKnown RBP2.63□□□□□ -1.99
VPS41-207ENST00000439468 LATO43561 262 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 B3GAT3O94766 335 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 CHRNA1P02708 482 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 HSPA5P11021 654 aaKnown RBP2.63□□□□□ -1.99
VPS41-207ENST00000439468 EPB41P11171 864 aaKnown RBP2.63□□□□□ -1.99
VPS41-207ENST00000439468 IGFBP5P24593 272 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 NAPAP54920 295 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 IL9RQ01113 521 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 ST3GAL3Q11203 375 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 ZNF154Q13106 437 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 Q1RN00 199 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 DCAF4L1Q3SXM0 396 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 CELF3Q5SZQ8 465 aaKnown RBP2.63□□□□□ -1.99
VPS41-207ENST00000439468 ATAD3CQ5T2N8 411 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 NCR3LG1Q68D85 454 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 SLC25A24Q6NUK1 477 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 TMEM184AQ6ZMB5 413 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 CENPUQ71F23 418 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 SERINC5Q86VE9 423 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 MCOLN2Q8IZK6 566 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 CENPLQ8N0S6 344 aaPredicted RBP2.63□□□□□ -1.99
VPS41-207ENST00000439468 BPIFB2Q8N4F0 458 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 CD177Q8N6Q3 437 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 FADS6Q8N9I5 356 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 NANPQ8TBE9 248 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 OSTF1Q92882 214 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 PINX1Q96BK5 328 aaKnown RBP2.63□□□□□ -1.99
VPS41-207ENST00000439468 TSSK1BQ9BXA7 367 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 NFKBIZQ9BYH8 718 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 WDR76Q9H967 626 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 XPO7Q9UIA9 1087 aaKnown RBP2.63□□□□□ -1.99
VPS41-207ENST00000439468 UTRNP46939 3433 aa2.63□□□□□ -1.99
VPS41-207ENST00000439468 POLR1AO95602 1720 aaPredicted RBP2.62□□□□□ -1.99
VPS41-207ENST00000439468 UHRF1BP1Q6BDS2 1440 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 TRIM49BA6NDI0 452 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 FCN1O00602 326 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 SLC17A2O00624 439 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 OR1F1O43749 312 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 STX11O75558 287 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 DUSP14O95147 198 aaKnown RBP2.62□□□□□ -1.99
VPS41-207ENST00000439468 IGKV3-15P01624 115 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 KRT6BP04259 564 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 IGF1P05019 195 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 PCCBP05166 539 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 ASNSP08243 561 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 CT45A10P0DMU9 189 aa2.62□□□□□ -1.99
VPS41-207ENST00000439468 CLUP10909 449 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms