RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 SLC22A10Q63ZE4 541 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 SLC30A6Q6NXT4 461 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 TUBA3EQ6PEY2 450 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 IL20RBQ6UXL0 311 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 GRAMD2AQ8IUY3 354 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 ZNF440Q8IYI8 595 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 POGLUT1Q8NBL1 392 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 FAM13CQ8NE31 585 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 OR10G3Q8NGC4 313 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 NTNG2Q96CW9 530 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 TBL1XR1Q9BZK7 514 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 SDHAF3Q9NRP4 125 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 KLHL28Q9NXS3 571 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 KCNE5Q9UJ90 142 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 PCDHGB6Q9Y5F9 930 aa11.64□□□□□ -0.55
SCLT1-202ENST00000439369 CHCHD2Q9Y6H1 151 aaPredicted RBP11.64□□□□□ -0.55
SCLT1-202ENST00000439369 SERINC4A6NH21 518 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 SUV39H1O43463 412 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 SNX4O95219 450 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 WDPCPO95876 746 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 CD247P20963 164 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 CD96P40200 585 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 ACTR3P61158 418 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 EEF1A1P68104 462 aaKnown RBP11.63□□□□□ -0.55
SCLT1-202ENST00000439369 CXADRP78310 365 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 OC90Q02509 493 aaPredicted RBP11.63□□□□□ -0.55
SCLT1-202ENST00000439369 MAPK14Q16539 360 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 TBR1Q16650 682 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 PDZK1Q5T2W1 519 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 FNDC7Q5VTL7 733 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 LINC00696Q6ZRV3 163 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 GALNT10Q86SR1 603 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 FAM71CQ8NEG0 241 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 TOR1AIP2Q8NFQ8 470 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 GRHL3Q8TE85 626 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 PROX1Q92786 737 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 DTNBP1Q96EV8 351 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 FRMD6Q96NE9 622 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 DOHHQ9BU89 302 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 UGT2B28Q9BY64 529 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 ANGPTL4Q9BY76 406 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 MAGIXQ9H6Y5 334 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 METTL7AQ9H8H3 244 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 EXOSC3Q9NQT5 275 aaKnown RBP11.63□□□□□ -0.55
SCLT1-202ENST00000439369 SACM1LQ9NTJ5 587 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 LRFN1Q9P244 771 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 TUBD1Q9UJT1 453 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 SLC13A4Q9UKG4 626 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 CNOT11Q9UKZ1 510 aaKnown RBP11.63□□□□□ -0.55
SCLT1-202ENST00000439369 ACACAQ13085 2346 aa11.63□□□□□ -0.55
SCLT1-202ENST00000439369 IGLV3-32A0A0A0MS00 114 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 TCRBV5S2A0A599 114 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 TCRBV3S1A0A5B6 114 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 CDHR4A6H8M9 788 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 EIF4E2O60573 245 aaKnown RBP11.62□□□□□ -0.55
SCLT1-202ENST00000439369 NEURL1O76050 574 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 P04436 131 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 UBL4AP11441 157 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 MSX1P28360 303 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 CASP3P42574 277 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 GAS1P54826 345 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 SUMO3P55854 103 aaPredicted RBP11.62□□□□□ -0.55
SCLT1-202ENST00000439369 KCNJ10P78508 379 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 RHDQ02161 417 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 DMTNQ08495 405 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 C17orf67Q0P5P2 114 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 ZNF468Q5VIY5 522 aaPredicted RBP11.62□□□□□ -0.55
SCLT1-202ENST00000439369 CYP2R1Q6VVX0 501 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 OLIG3Q7RTU3 272 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 ZNF227Q86WZ6 799 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 VRK2Q86Y07 508 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 SPPL2CQ8IUH8 684 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 MDS2Q8NDY4 140 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 GEMIN6Q8WXD5 167 aaKnown RBP11.62□□□□□ -0.55
SCLT1-202ENST00000439369 ZG16BQ96DA0 208 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 DUS3LQ96G46 650 aaKnown RBP11.62□□□□□ -0.55
SCLT1-202ENST00000439369 PYURFQ96I23 114 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 NODALQ96S42 347 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 OSBPL11Q9BXB4 747 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 QRSL1Q9H0R6 528 aaKnown RBP11.62□□□□□ -0.55
SCLT1-202ENST00000439369 ADNPQ9H2P0 1102 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 SLC9A8Q9Y2E8 581 aa11.62□□□□□ -0.55
SCLT1-202ENST00000439369 URB1O60287 2271 aaKnown RBP11.62□□□□□ -0.55
SCLT1-202ENST00000439369 EXPH5Q8NEV8 1989 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 NPIPA5A0A0B4J1W7 369 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 TMEM229AB2RXF0 380 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 NPIPA7E9PJI5 369 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 ADAM10O14672 748 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 NDUFB5O43674 189 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 ZNF682O95780 498 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 LGI1O95970 557 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 CSTAP01040 98 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 FESP07332 822 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 NPIPA8P0DM63 369 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 CD46P15529 392 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 PSMA4P25789 261 aaKnown RBP11.61□□□□□ -0.55
SCLT1-202ENST00000439369 ARG2P78540 354 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 KCNC4Q03721 635 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 RAPSNQ13702 412 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 OR1C1Q15619 314 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms