RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 ANKZF1Q9H8Y5 726 aa16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 ZCCHC3Q9NUD5 404 aaKnown RBP16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 ZNF226Q9NYT6 803 aa16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 NTMQ9P121 344 aa16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 SNX8Q9Y5X2 465 aa16.62■□□□□ 0.25
AC004540.1-201ENST00000439120 AKAP6Q13023 2319 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 A0A087WZY1 265 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 SHISA8B8ZZ34 492 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 EIF1AYO14602 144 aaKnown RBP16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 SCAMP2O15127 329 aaKnown RBP16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 PEX11AO75192 247 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 KCNK2O95069 426 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 ATE1O95260 518 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 HSPA4LO95757 839 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 PLGP00747 810 aaPredicted RBP16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 NGFRP08138 427 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 POU2F1P14859 743 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 ZNF17P17021 662 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 TBXA2RP21731 343 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 LCN1P31025 176 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 SERPINB5P36952 375 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 CD79BP40259 229 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 MAP3K8P41279 467 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 EIF1AXP47813 144 aaKnown RBP16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 FAM27E3Q08E93 113 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 DUSP5Q16690 384 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 DEFB113Q30KQ7 82 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 ZCCHC23Q6ZST2 131 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 BTLAQ7Z6A9 289 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 METTL25Q8N6Q8 603 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 OR4C3Q8NH37 302 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 TCP10LQ8TDR4 215 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 OTUB1Q96FW1 271 aaPredicted RBP16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 MED18Q9BUE0 208 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 TMUB1Q9BVT8 246 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 OPN3Q9H1Y3 402 aaPredicted RBP16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 PLEKHF2Q9H8W4 249 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 RNF122Q9H9V4 155 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 UBQLN4Q9NRR5 601 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 ATAD3AQ9NVI7 634 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 LGALS13Q9UHV8 139 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 TESMINQ9Y4I5 508 aa16.61■□□□□ 0.25
AC004540.1-201ENST00000439120 C2CD3Q4AC94 2353 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 ITPR3Q14573 2671 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 A0A1W2PRB8 838 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 DIAPH2O60879 1101 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 SLU7O95391 586 aaKnown RBP16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 ATP6V1C1P21283 382 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 ME2P23368 584 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 KIR2DL2P43627 348 aaPredicted RBP16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 POU6F2P78424 691 aaPredicted RBP16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 OCRLQ01968 901 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 MLC1Q15049 377 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 UGT3A2Q3SY77 523 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 SPDYE7PQ495Y7 208 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 MISPQ8IVT2 679 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 WDR75Q8IWA0 830 aaKnown RBP16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 FNDC5Q8NAU1 212 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 OR7A2PQ8NGA2 310 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 ZBTB8AQ96BR9 441 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 FAM120BQ96EK7 910 aaKnown RBP16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 C16orf58Q96GQ5 468 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 SH3YL1Q96HL8 342 aaPredicted RBP16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 BTBD2Q9BX70 525 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 ROPN1BQ9BZX4 212 aaPredicted RBP16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 ROPN1Q9HAT0 212 aaPredicted RBP16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 KLHL28Q9NXS3 571 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 ELOVL5Q9NYP7 299 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 GIMAP2Q9UG22 337 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 ATP6V1HQ9UI12 483 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 MCTS1Q9ULC4 181 aaKnown RBP16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 PROCRQ9UNN8 238 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 EMC9Q9Y3B6 208 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 PCNX3Q9H6A9 2034 aa16.6■□□□□ 0.25
AC004540.1-201ENST00000439120 SKAP2O75563 359 aaPredicted RBP16.59■□□□□ 0.25
AC004540.1-201ENST00000439120 SYNGR4O95473 234 aa16.59■□□□□ 0.25
AC004540.1-201ENST00000439120 HMGN2P05204 90 aaKnown RBP16.59■□□□□ 0.25
AC004540.1-201ENST00000439120 PCYT1AP49585 367 aa16.59■□□□□ 0.25
AC004540.1-201ENST00000439120 VSNL1P62760 191 aa16.59■□□□□ 0.25
AC004540.1-201ENST00000439120 LASP1Q14847 261 aaKnown RBP16.59■□□□□ 0.25
AC004540.1-201ENST00000439120 CPTPQ5TA50 214 aa16.59■□□□□ 0.25
AC004540.1-201ENST00000439120 ZNF527Q8NB42 609 aa16.59■□□□□ 0.25
AC004540.1-201ENST00000439120 PPP1R14CQ8TAE6 165 aa16.59■□□□□ 0.25
AC004540.1-201ENST00000439120 FAM110BQ8TC76 370 aa16.59■□□□□ 0.25
AC004540.1-201ENST00000439120 PRPF18Q99633 342 aaKnown RBP16.59■□□□□ 0.25
AC004540.1-201ENST00000439120 C1orf50Q9BV19 199 aa16.59■□□□□ 0.25
AC004540.1-201ENST00000439120 NEUROD4Q9HD90 331 aa16.59■□□□□ 0.25
AC004540.1-201ENST00000439120 PAQR5Q9NXK6 330 aaPredicted RBP16.59■□□□□ 0.25
AC004540.1-201ENST00000439120 FAF1Q9UNN5 650 aaPredicted RBP16.59■□□□□ 0.25
AC004540.1-201ENST00000439120 PRRC2AP48634 2157 aaKnown RBP16.59■□□□□ 0.25
AC004540.1-201ENST00000439120 C16orf97H3BN30 126 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 LYPLA1O75608 230 aaPredicted RBP16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 KRT16P08779 473 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 CD8BP10966 210 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 UGT2B10P36537 528 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 CTBP2P56545 445 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 FOXD4Q12950 439 aaPredicted RBP16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 TP53BP2Q13625 1128 aa16.58■□□□□ 0.24
AC004540.1-201ENST00000439120 PTGR1Q14914 329 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms