RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 C15orf41Q9Y2V0 281 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 DHRS7Q9Y394 339 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 MFHAS1Q9Y4C4 1052 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 ASB3Q9Y575 518 aa2.93□□□□□ -1.94
LSM1P1-201ENST00000438629 FER1L5A0AVI2 2057 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 TRAV6A0A075B6T7 132 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 A0A0J9YVX5 310 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 CYSRT1A8MQ03 144 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 A8MUI8 341 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 NPIPA2E9PIF3 369 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 PDLIM1O00151 329 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 CXCL11O14625 94 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 OAS1P00973 400 aaKnown RBP2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 CCDC130P13994 396 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 HPGDP15428 266 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 HTR2AP28223 471 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 MAT2AP31153 395 aaKnown RBP2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 OR1G1P47890 313 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 FNTAP49354 379 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 DHPSP49366 369 aaPredicted RBP2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 METAP1P53582 386 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 ARPC4P59998 168 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 HERVK_113P63132 956 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 ERVK-8P63133 956 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 NOP14P78316 857 aaKnown RBP2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 HSF2Q03933 536 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 PPIDQ08752 370 aaKnown RBP2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 CD226Q15762 336 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 DPYSL2Q16555 572 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 PPP1R3AQ16821 1122 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 HADHQ16836 314 aaKnown RBP2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 Q1RN00 199 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 MICAQ29983 383 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 PARP6Q2NL67 630 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 SMUG1Q53HV7 270 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 ACER2Q5QJU3 275 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 ATAD3CQ5T2N8 411 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 FAM219BQ5XKK7 198 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 LRRC8BQ6P9F7 803 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 METAP1DQ6UB28 335 aaPredicted RBP2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 FAM159AQ6UWV7 190 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 VITQ6UXI7 678 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 C1orf186Q6ZWK4 172 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 GOLGA7Q7Z5G4 137 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 GPBP1Q86WP2 473 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 ZNF679Q8IYX0 411 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 STEAP2Q8NFT2 490 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 OR6T1Q8NGN1 323 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 CCDC26Q8TAB7 109 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 NCLNQ969V3 563 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 PINX1Q96BK5 328 aaKnown RBP2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 C9orf85Q96MD7 179 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 DEFB118Q96PH6 123 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 MTMR9Q96QG7 549 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 ZSCAN5AQ9BUG6 496 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 ERVK-6Q9BXR3 956 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 CRNKL1Q9BZJ0 848 aaKnown RBP2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 RPRD1BQ9NQG5 326 aaKnown RBP2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 FAM114A2Q9NRY5 505 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 MIOXQ9UGB7 285 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 MTRF1LQ9UGC7 380 aaKnown RBP2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 IKZF3Q9UKT9 509 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 PSME2Q9UL46 239 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 MAB21L2Q9Y586 359 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 ZMYM6O95789 1325 aa2.92□□□□□ -1.94
LSM1P1-201ENST00000438629 KANK1Q14678 1352 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 TRAV9-2A0A087WT02 112 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 GOLGA6L7A0A1B0GV03 622 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 NCF1BA6NI72 391 aaPredicted RBP2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 NCF1CA8MVU1 366 aaPredicted RBP2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 PRRG1O14668 218 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 ZNF354AO60765 605 aaPredicted RBP2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 VPS26AO75436 327 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 RHBDL1O75783 438 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 FLOT1O75955 427 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 PROS1P07225 676 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 HOXB7P09629 217 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 H2AFZP0C0S5 128 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 TROVE2P10155 538 aaKnown RBP eCLIP2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 RRASP10301 218 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 ATP6V1C1P21283 382 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 GALP22466 123 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 HAAOP46952 286 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 CEBPDP49716 269 aaPredicted RBP2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 SGSHP51688 502 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 ACTR3P61158 418 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 MRPS15P82914 257 aaKnown RBP2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 MYBPC1Q00872 1141 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 RUNX3Q13761 415 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 PDK3Q15120 406 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 PDK4Q16654 411 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 TATDN3Q17R31 274 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 LRIT3Q3SXY7 679 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 ACSF3Q4G176 576 aaPredicted RBP2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 PMF1Q6P1K2 205 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 FAM173BQ6P4H8 233 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 CES3Q6UWW8 571 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 TSEN54Q7Z6J9 526 aaKnown RBP2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 HPS6Q86YV9 775 aa2.91□□□□□ -1.94
LSM1P1-201ENST00000438629 ZDHHC21Q8IVQ6 265 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms