RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 CUTCQ9NTM9 273 aa23.82■■□□□ 1.4
CPNE1-216ENST00000437340 NPIPA5A0A0B4J1W7 369 aa23.81■■□□□ 1.4
CPNE1-216ENST00000437340 NPIPA7E9PJI5 369 aa23.81■■□□□ 1.4
CPNE1-216ENST00000437340 TLX2O43763 284 aaPredicted RBP23.81■■□□□ 1.4
CPNE1-216ENST00000437340 CLPXO76031 633 aa23.81■■□□□ 1.4
CPNE1-216ENST00000437340 PTHP01270 115 aa23.81■■□□□ 1.4
CPNE1-216ENST00000437340 GIMD1P0DJR0 217 aa23.81■■□□□ 1.4
CPNE1-216ENST00000437340 NPIPA8P0DM63 369 aa23.81■■□□□ 1.4
CPNE1-216ENST00000437340 HTR2AP28223 471 aa23.81■■□□□ 1.4
CPNE1-216ENST00000437340 ARL4DP49703 201 aa23.81■■□□□ 1.4
CPNE1-216ENST00000437340 MN1Q10571 1320 aaPredicted RBP23.81■■□□□ 1.4
CPNE1-216ENST00000437340 OR1Q1Q15612 314 aa23.81■■□□□ 1.4
CPNE1-216ENST00000437340 MOGQ16653 247 aa23.81■■□□□ 1.4
CPNE1-216ENST00000437340 SLC35B4Q969S0 331 aa23.81■■□□□ 1.4
CPNE1-216ENST00000437340 DTNBP1Q96EV8 351 aa23.81■■□□□ 1.4
CPNE1-216ENST00000437340 IL20Q9NYY1 176 aa23.81■■□□□ 1.4
CPNE1-216ENST00000437340 OR2B3O76000 313 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 PRG2P13727 222 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 MAOAP21397 527 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 ZNF91Q05481 1191 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 SNAPC1Q16533 368 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 LINC00299Q6ZSB3 139 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 SLC46A3Q7Z3Q1 461 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 D2HGDHQ8N465 521 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 CLDN22Q8N7P3 220 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 POGLUT1Q8NBL1 392 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 TMEM80Q96HE8 168 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 SLC38A2Q96QD8 506 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 PRSS27Q9BQR3 290 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 TSSK6Q9BXA6 273 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 PLGRKTQ9HBL7 147 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 Q9N2J8 555 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 MMACHCQ9Y4U1 282 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 TTC28Q96AY4 2481 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 DBTP11182 482 aaKnown RBP23.8■■□□□ 1.4
CPNE1-216ENST00000437340 ARRB1P49407 418 aaPredicted RBP23.8■■□□□ 1.4
CPNE1-216ENST00000437340 PLK5Q496M5 336 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 ZAR1Q86SH2 424 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 KMT5CQ86Y97 462 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 TMEM163Q8TC26 289 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 OR1F2PQ96R84 312 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 ELF4Q99607 663 aaPredicted RBP23.8■■□□□ 1.4
CPNE1-216ENST00000437340 ZNF559Q9BR84 538 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 G6PC3Q9BUM1 346 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 TEX12Q9BXU0 123 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 DSN1Q9H410 356 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 CAPN10Q9HC96 672 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 GMEB2Q9UKD1 530 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 FBXO4Q9UKT5 387 aa23.8■■□□□ 1.4
CPNE1-216ENST00000437340 SNTNA6NMZ2 147 aa23.79■■□□□ 1.4
CPNE1-216ENST00000437340 M0R3G1 203 aa23.79■■□□□ 1.4
CPNE1-216ENST00000437340 HRKO00198 91 aa23.79■■□□□ 1.4
CPNE1-216ENST00000437340 INHBBP09529 407 aa23.79■■□□□ 1.4
CPNE1-216ENST00000437340 MSL3P1P0C860 447 aa23.79■■□□□ 1.4
CPNE1-216ENST00000437340 GKN3PP0CG01 181 aa23.79■■□□□ 1.4
CPNE1-216ENST00000437340 PSMD4P55036 377 aaKnown RBP23.79■■□□□ 1.4
CPNE1-216ENST00000437340 CFHR1Q03591 330 aa23.79■■□□□ 1.4
CPNE1-216ENST00000437340 OCA2Q04671 838 aa23.79■■□□□ 1.4
CPNE1-216ENST00000437340 KCNAB1Q14722 419 aa23.79■■□□□ 1.4
CPNE1-216ENST00000437340 SYT14P1Q58G82 188 aa23.79■■□□□ 1.4
CPNE1-216ENST00000437340 ZNF613Q6PF04 617 aa23.79■■□□□ 1.4
CPNE1-216ENST00000437340 C11orf74Q86VG3 221 aa23.79■■□□□ 1.4
CPNE1-216ENST00000437340 METTL27Q8N6F8 245 aaPredicted RBP23.79■■□□□ 1.4
CPNE1-216ENST00000437340 C7orf57Q8NEG2 295 aa23.79■■□□□ 1.4
CPNE1-216ENST00000437340 OR8D4Q8NGM9 314 aa23.79■■□□□ 1.4
CPNE1-216ENST00000437340 LGALS12Q96DT0 336 aa23.79■■□□□ 1.4
CPNE1-216ENST00000437340 LRR1Q96L50 414 aa23.79■■□□□ 1.4
CPNE1-216ENST00000437340 CNPPD1Q9BV87 410 aa23.79■■□□□ 1.4
CPNE1-216ENST00000437340 OR10A5Q9H207 317 aa23.79■■□□□ 1.4
CPNE1-216ENST00000437340 SPTBP11277 2137 aa23.79■■□□□ 1.4
CPNE1-216ENST00000437340 PI4KAP42356 2102 aa23.79■■□□□ 1.4
CPNE1-216ENST00000437340 TMEM150CB9EJG8 249 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 LYPD3O95274 346 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 CSTF2P33240 577 aaKnown RBP eCLIP23.78■■□□□ 1.42e-45■■■■■ 66.1
CPNE1-216ENST00000437340 SEPHS1P49903 392 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 RHAGQ02094 409 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 ZNF141Q15928 474 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 WDR74Q6RFH5 385 aaPredicted RBP23.78■■□□□ 1.4
CPNE1-216ENST00000437340 ZNF620Q6ZNG0 422 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 PRSS42Q7Z5A4 293 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 CROCCP3Q8IVE0 287 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 OR7G1Q8NGA0 311 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 SLC41A2Q96JW4 573 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 RACGAP1Q9H0H5 632 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 TMEM27Q9HBJ8 222 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 LANCL2Q9NS86 450 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 PRODH2Q9UF12 536 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 ERVK-19Q9WJR5 959 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 NTN1O95631 604 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 IFNA16P05015 189 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 GCGRP47871 477 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 ENTPD1P49961 510 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 VBP1P61758 197 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 PLAURQ03405 335 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 AMZ1Q400G9 498 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 ARMCX4Q5H9R4 360 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 PDZK1Q5T2W1 519 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 NPSR1Q6W5P4 371 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 TTLL10Q6ZVT0 673 aa23.78■■□□□ 1.4
CPNE1-216ENST00000437340 MEX3DQ86XN8 651 aaKnown RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms