RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 EMC8O43402 210 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 NCR1O76036 304 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 IFNA16P05015 189 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 ALPPP05187 535 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 FCER2P06734 321 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 DDOSTP39656 456 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 TSPAN31Q12999 210 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 GALEQ14376 348 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 CCNJQ5T5M9 372 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 TYW3Q6IPR3 259 aaKnown RBP9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 NRMQ8IXM6 262 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 OR56A1Q8NGH5 318 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 CCL4L1Q8NHW4 92 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 SFXN5Q8TD22 340 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 WDFY2Q96P53 400 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 TBC1D29Q9UFV1 150 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 SLC17A4Q9Y2C5 497 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 CSNK1G3Q9Y6M4 447 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 CEP290O15078 2479 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 SLC35F4A4IF30 521 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 POM121BA6NF01 834 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 FAM183AA6NL82 134 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 CSF3P09919 207 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 NR2F6P10588 404 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 RPL35P42766 123 aaKnown RBP9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 PRR5P85299 388 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 ZNF791Q3KP31 576 aaPredicted RBP9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 PLK5Q496M5 336 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 ZNF425Q6IV72 752 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 SLC36A4Q6YBV0 504 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 MRGPREQ86SM8 312 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 TMEFF1Q8IYR6 380 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 YIPF7Q8N8F6 280 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 HERVK_113Q902F9 699 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 CDS1Q92903 461 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 DIRAS2Q96HU8 199 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 MSLNLQ96KJ4 702 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 C10orf90Q96M02 699 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 TIMM29Q9BSF4 260 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 SLC17A9Q9BYT1 436 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 MCOLN1Q9GZU1 580 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 FGF20Q9NP95 211 aaPredicted RBP9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 CD93Q9NPY3 652 aa9.72□□□□□ -0.85
CLSTN1-203ENST00000435891 HMX3A6NHT5 357 aa9.71□□□□□ -0.85
CLSTN1-203ENST00000435891 H0Y8X5 98 aa9.71□□□□□ -0.85
CLSTN1-203ENST00000435891 IL1AP01583 271 aa9.71□□□□□ -0.85
CLSTN1-203ENST00000435891 MPIP34949 423 aa9.71□□□□□ -0.85
CLSTN1-203ENST00000435891 AHRP35869 848 aa9.71□□□□□ -0.85
CLSTN1-203ENST00000435891 ID2Q02363 134 aa9.71□□□□□ -0.85
CLSTN1-203ENST00000435891 RAB40BQ12829 278 aa9.71□□□□□ -0.85
CLSTN1-203ENST00000435891 SGCGQ13326 291 aa9.71□□□□□ -0.85
CLSTN1-203ENST00000435891 AGERQ15109 404 aa9.71□□□□□ -0.85
CLSTN1-203ENST00000435891 POU4F3Q15319 338 aa9.71□□□□□ -0.85
CLSTN1-203ENST00000435891 BHLHB9Q6PI77 547 aa9.71□□□□□ -0.85
CLSTN1-203ENST00000435891 FRRS1Q6ZNA5 592 aa9.71□□□□□ -0.85
CLSTN1-203ENST00000435891 CFAP77Q6ZQR2 320 aa9.71□□□□□ -0.85
CLSTN1-203ENST00000435891 TMCO6Q96DC7 493 aa9.71□□□□□ -0.85
CLSTN1-203ENST00000435891 ZNF649Q9BS31 505 aa9.71□□□□□ -0.85
CLSTN1-203ENST00000435891 C1QTNF2Q9BXJ5 285 aa9.71□□□□□ -0.85
CLSTN1-203ENST00000435891 MRPS18AQ9NVS2 196 aaKnown RBP9.71□□□□□ -0.85
CLSTN1-203ENST00000435891 TEX51A0A1B0GUA7 166 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 TMEM129A0AVI4 362 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 ZC3H12DA2A288 527 aaKnown RBP9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 ZNF888P0CJ79 500 aaPredicted RBP9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 GSTM3P21266 225 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 C5AR1P21730 350 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 ERP29P30040 261 aaKnown RBP9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 CDH11P55287 796 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 PPP2CBP62714 309 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 PPP2CAP67775 309 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 ABATP80404 500 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 FAPQ12884 760 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 ZNF155Q12901 538 aaPredicted RBP9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 FZD5Q13467 585 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 GPM6BQ13491 265 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 TPBGQ13641 420 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 TRAM2Q15035 370 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 MINDY4Q4G0A6 757 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 KLHL22Q53GT1 634 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 ZNF784Q8NCA9 323 aaPredicted RBP9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 ZCCHC10Q8TBK6 192 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 GNPDA2Q8TDQ7 276 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 RIPOR3Q96MK2 946 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 KCTD7Q96MP8 289 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 ARHGAP9Q9BRR9 750 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 TMED9Q9BVK6 235 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 ENKD1Q9H0I2 346 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 ACOXLQ9NUZ1 547 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 MALT1Q9UDY8 824 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 FABP12A6NFH5 140 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 LEUTXA8MZ59 168 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 KDM4EB2RXH2 506 aaPredicted RBP9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 SOCS6O14544 535 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 PRG2P13727 222 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 FOSL1P15407 271 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 MYL9P24844 172 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 EVI2BP34910 448 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 SLC1A3P43003 542 aa9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 RGS8P57771 180 aaPredicted RBP9.71□□□□□ -0.86
CLSTN1-203ENST00000435891 ERVK-21P61565 698 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms