RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 PANX3Q96QZ0 392 aa2.32□□□□□ -2.04
CLK1-204ENST00000432425 SDHCQ99643 169 aaPredicted RBP2.32□□□□□ -2.04
CLK1-204ENST00000432425 TMEM117Q9H0C3 514 aa2.32□□□□□ -2.04
CLK1-204ENST00000432425 PSTPIP2Q9H939 334 aa2.32□□□□□ -2.04
CLK1-204ENST00000432425 Q9HAA7 133 aa2.32□□□□□ -2.04
CLK1-204ENST00000432425 LY9Q9HBG7 655 aa2.32□□□□□ -2.04
CLK1-204ENST00000432425 LEF1Q9UJU2 399 aaPredicted RBP2.32□□□□□ -2.04
CLK1-204ENST00000432425 RAI1Q7Z5J4 1906 aaPredicted RBP2.32□□□□□ -2.04
CLK1-204ENST00000432425 C15orf38-AP3S2A0A0A6YYH1 394 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 IGHV3-35A0A0C4DH35 117 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 LOC100653049A0A140TA62 436 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 TTC26A0AVF1 554 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 FRG2CA6NGY1 282 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 SLC15A5A6NIM6 579 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 OR6C65A6NJZ3 312 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 NDUFS8O00217 210 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 CASC3O15234 703 aaKnown RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 YKT6O15498 198 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 ADAM12O43184 909 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 CTAG2O75638 210 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 SURF6O75683 361 aaKnown RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 KRT34O76011 436 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 KLHL2O95198 593 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 GAS8O95995 478 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 MT-ATP6P00846 226 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 EPOP01588 193 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 IQCF3P0C7M6 154 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 P0C879 139 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 MBL2P11226 248 aaPredicted RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 RALAP11233 206 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 GCFC2P16383 781 aaKnown RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 ELK1P19419 428 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 HNRNPA2B1P22626 353 aaKnown RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 PSMA5P28066 241 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 NF2P35240 595 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 RFC2P35250 354 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 NUP62P37198 522 aaPredicted RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 BASP1P80723 227 aaKnown RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 XIAPP98170 497 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 HSPA14Q0VDF9 509 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 TEFQ10587 303 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 SPP2Q13103 211 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 ARHGAP19Q14CB8 494 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 ZMYND11Q15326 602 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 USH1GQ495M9 461 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 SULT1C3Q6IMI6 304 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 TAS2R42Q7RTR8 314 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 MIER3Q7Z3K6 550 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 TMCO2Q7Z6W1 182 aaPredicted RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 FBXO16Q8IX29 292 aaPredicted RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 EFCAB13Q8IY85 973 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 OR2L5Q8NG80 312 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 EXOC6Q8TAG9 804 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 SLC22A8Q8TCC7 542 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 U2AF1L4Q8WU68 220 aaKnown RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 AP2M1Q96CW1 435 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 LRRC39Q96DD0 335 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 RAB3CQ96E17 227 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 ZNF560Q96MR9 790 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 GUCD1Q96NT3 240 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 CASD1Q96PB1 797 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 SECISBP2Q96T21 854 aaKnown RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 SPAG8Q99932 426 aaPredicted RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 ST6GALNAC5Q9BVH7 336 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 BBS2Q9BXC9 721 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 TBC1D10AQ9BXI6 508 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 NAPBQ9H115 298 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 ECT2Q9H8V3 914 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 SPACA1Q9HBV2 294 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 SLC25A19Q9HC21 320 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 NRBP2Q9NSY0 501 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 RAB20Q9NX57 234 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 ANKMY1Q9P2S6 941 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 PRODH2Q9UF12 536 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 DNPEPQ9ULA0 475 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 KIAA1257Q9ULG3 409 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 MOKQ9UQ07 419 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 SPACA6W5XKT8 324 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 KIF7Q2M1P5 1343 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 LOC100506127A0A0U1RQW1 187 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 C13orf42A0A1B0GVH6 325 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 EPOPA6NHQ4 379 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 GOLGA8SH3BPF8 625 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 K7ERI5 159 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 RASGRF2O14827 1237 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 CHADO15335 359 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 OR5F1O95221 314 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 GJB5O95377 273 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 GNA14O95837 355 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 PRB2P02812 416 aaPredicted RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 PCCBP05166 539 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 SBK2P0C263 348 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 UBTFL6P0CB48 400 aaPredicted RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 SLC35E2P0CK97 266 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 EPB41P11171 864 aaKnown RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 CTNNB1P35222 781 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 SERPINH1P50454 418 aaKnown RBP2.31□□□□□ -2.04
CLK1-204ENST00000432425 RIPK4P57078 832 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 DSTNP60981 165 aa2.31□□□□□ -2.04
CLK1-204ENST00000432425 TPM4P67936 248 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms