RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 ANKRD46Q86W74 232 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 NATD1Q8N6N6 113 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 C9orf106Q8NAJ2 232 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 RELL2Q8NC24 303 aaPredicted RBP8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 OR4A15Q8NGL6 344 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 OR5M1Q8NGP8 315 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 OR4C3Q8NH37 302 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 PSMA8Q8TAA3 256 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SFXN5Q8TD22 340 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 DUSP19Q8WTR2 217 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SMPDL3BQ92485 455 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 C1GALT1C1Q96EU7 318 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 STACQ99469 402 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SPOCK3Q9BQ16 436 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 TUBA1CQ9BQE3 449 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 BTBD2Q9BX70 525 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ACTRT3Q9BYD9 372 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 PTGES2Q9H7Z7 377 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 MEAF6Q9HAF1 191 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 DUSP22Q9NRW4 184 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 THAP1Q9NVV9 213 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 GPATCH2Q9NW75 528 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 FBXO34Q9NWN3 711 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 GIN1Q9NXP7 522 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ZNF407Q9C0G0 2248 aa8.35□□□□□ -1.07
RFX3-AS1-202ENST00000427722 IGLV3-32A0A0A0MS00 114 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 NPIPA5A0A0B4J1W7 369 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 GOLGA8QA0A0J9YX86 632 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 GOLGA8OA6NCC3 632 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 MBD3L4A6NDZ8 208 aaPredicted RBP8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 MBD3L3A6NE82 208 aaPredicted RBP8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 MBD3L5A6NJ08 208 aaPredicted RBP8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CD8B2A6NJW9 211 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CLCA1A8K7I4 914 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SHISA8B8ZZ34 492 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 EEF1E1-BLOC1S5C9J1V9 151 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ALG1L2C9J202 215 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 C9JVG2 144 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 E9PBE3 544 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 NPIPA7E9PJI5 369 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 GOLGA8NF8WBI6 632 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 H3BML4 177 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SCDO00767 359 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ANKRD28O15084 1053 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 HDAC3O15379 428 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 EEF1E1O43324 174 aaKnown RBP8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 NDUFB5O43674 189 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ZIC3O60481 467 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SNNO75324 88 aaPredicted RBP8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 THBS1P07996 1170 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 NGFRP08138 427 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ALDOCP09972 364 aaKnown RBP8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 NPIPA8P0DM63 369 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CPN1P15169 458 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ZNF708P17019 499 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 IGFBP2P18065 325 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ZNF136P52737 540 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 DGKQP52824 942 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SLC18A1P54219 525 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CLDN18P56856 261 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 B3GALT5-AS1P59052 145 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CD226Q15762 336 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 FAM174BQ3ZCQ3 159 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SPANXN4Q5MJ08 99 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 DCST2Q5T1A1 773 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 AGBL2Q5U5Z8 902 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 OGFOD2Q6N063 350 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 BHLHB9Q6PI77 547 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ARSKQ6UWY0 536 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 GRAMD2AQ8IUY3 354 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 UBQLNLQ8IYU4 475 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ZNF295-AS1Q8N0V1 137 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CLEC4FQ8N1N0 589 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ACBD4Q8NC06 268 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 OR5D16Q8NGK9 328 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 MBD3L2Q8NHZ7 208 aaPredicted RBP8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ZPLD1Q8TCW7 415 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ADAMTS15Q8TE58 950 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ARL8AQ96BM9 186 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 MOAP1Q96BY2 351 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SH3YL1Q96HL8 342 aaPredicted RBP8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SLC35G5Q96KT7 338 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 G6PC3Q9BUM1 346 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ENKD1Q9H0I2 346 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 PIGUQ9H490 435 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 WDR55Q9H6Y2 383 aaPredicted RBP8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 MANSC1Q9H8J5 431 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 UBQLN4Q9NRR5 601 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 AIG1Q9NVV5 245 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 KCNE3Q9Y6H6 103 aa8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 NCOA6Q14686 2063 aaPredicted RBP8.34□□□□□ -1.07
RFX3-AS1-202ENST00000427722 OR2M5A3KFT3 312 aa8.33□□□□□ -1.08
RFX3-AS1-202ENST00000427722 TRPC5OSA6NMA1 111 aa8.33□□□□□ -1.08
RFX3-AS1-202ENST00000427722 H0YC42 278 aa8.33□□□□□ -1.08
RFX3-AS1-202ENST00000427722 RNASET2O00584 256 aaKnown RBP8.33□□□□□ -1.08
RFX3-AS1-202ENST00000427722 HCRTR2O43614 444 aa8.33□□□□□ -1.08
RFX3-AS1-202ENST00000427722 CPSF4O95639 269 aaKnown RBP8.33□□□□□ -1.08
RFX3-AS1-202ENST00000427722 TBXA2RP21731 343 aa8.33□□□□□ -1.08
RFX3-AS1-202ENST00000427722 CHMP24386 653 aa8.33□□□□□ -1.08
RFX3-AS1-202ENST00000427722 EPHA3P29320 983 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms