RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 CLDN3O15551 220 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 STX11O75558 287 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 SLC2A10O95528 541 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 DIRAS3O95661 229 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 APBB3O95704 486 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 PGK1P00558 417 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 AK1P00568 194 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 PTMAP06454 111 aaKnown RBP1.85□□□□□ -2.11
PTPRC-208ENST00000427110 NCF1P14598 390 aaPredicted RBP1.85□□□□□ -2.11
PTPRC-208ENST00000427110 H2AFXP16104 143 aaPredicted RBP1.85□□□□□ -2.11
PTPRC-208ENST00000427110 KLK2P20151 261 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 DPP4P27487 766 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 AXLP30530 894 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 IL2RGP31785 369 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 NF2P35240 595 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 MDH2P40926 338 aaKnown RBP1.85□□□□□ -2.11
PTPRC-208ENST00000427110 CD86P42081 329 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 GNPDA1P46926 289 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 OR1D4P47884 311 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 GPC3P51654 580 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 CXCL6P80162 114 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 HTD2P86397 168 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 BDH1Q02338 343 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 RGS1Q08116 209 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 OVGP1Q12889 678 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 PDZK1IP1Q13113 114 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 SCGB2A2Q13296 93 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 CHI3L2Q15782 390 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 CAMK4Q16566 473 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 CDKN3Q16667 212 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 ZNF311Q5JNZ3 666 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 OR8G2PQ6IF36 304 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 LRRC8BQ6P9F7 803 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 BAIAP2L2Q6UXY1 529 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 CENPUQ71F23 418 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 LRRC70Q7Z2Q7 622 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 HSD11B1LQ7Z5J1 315 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 CBWD2Q8IUF1 395 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 GCNT2Q8N0V5 402 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 FBXL16Q8N461 479 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 LINC00612Q8N6U2 182 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 ZSCAN4Q8NAM6 433 aaPredicted RBP1.85□□□□□ -2.11
PTPRC-208ENST00000427110 NFAM1Q8NET5 270 aaPredicted RBP1.85□□□□□ -2.11
PTPRC-208ENST00000427110 CCDC26Q8TAB7 109 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 DHTKD1Q96HY7 919 aaPredicted RBP1.85□□□□□ -2.11
PTPRC-208ENST00000427110 C16orf45Q96MC5 204 aaPredicted RBP1.85□□□□□ -2.11
PTPRC-208ENST00000427110 SIGLEC12Q96PQ1 595 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 ZNF416Q9BWM5 594 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 TSSK1BQ9BXA7 367 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 CCSER1Q9C0I3 900 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 ECT2Q9H8V3 914 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 MEPEQ9NQ76 525 aaPredicted RBP1.85□□□□□ -2.11
PTPRC-208ENST00000427110 POLE3Q9NRF9 147 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 UTP6Q9NYH9 597 aaKnown RBP1.85□□□□□ -2.11
PTPRC-208ENST00000427110 ATXN10Q9UBB4 475 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 EIF3LQ9Y262 564 aaKnown RBP1.85□□□□□ -2.11
PTPRC-208ENST00000427110 U3KQV3 271 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 UHRF1BP1LA0JNW5 1464 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 BCORL1Q5H9F3 1711 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 ABCC2Q92887 1545 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 ANKRD30AQ9BXX3 1397 aa1.85□□□□□ -2.11
PTPRC-208ENST00000427110 DEPDC5O75140 1603 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 ZCCHC11Q5TAX3 1644 aaKnown RBP1.84□□□□□ -2.11
PTPRC-208ENST00000427110 TRPM1Q7Z4N2 1603 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 USP6P35125 1406 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 CNTLNQ9NXG0 1405 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 ATP10AO60312 1499 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 CCDC141Q6ZP82 1450 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 MAGI2Q86UL8 1455 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 PLEKHH2Q8IVE3 1493 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 CEP152O94986 1710 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 A0A087WZY1 265 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 SAGE2PA6NJ88 616 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 ZSCAN5BA6NJL1 495 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 FAM74A7A6NL05 159 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 SLC17A2O00624 439 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 TM9SF1O15321 606 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 CHADO15335 359 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 DUSP14O95147 198 aaKnown RBP1.84□□□□□ -2.11
PTPRC-208ENST00000427110 MBD3O95983 291 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 JCHAINP01591 159 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 IGKV3-15P01624 115 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 CSF2P04141 144 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 IGHV1-2P23083 117 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 ATP5A1P25705 553 aaKnown RBP1.84□□□□□ -2.11
PTPRC-208ENST00000427110 PRKAR2BP31323 418 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 RPL4P36578 427 aaKnown RBP1.84□□□□□ -2.11
PTPRC-208ENST00000427110 MAGEA5P43359 124 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 NOVA1P51513 510 aaKnown RBP1.84□□□□□ -2.11
PTPRC-208ENST00000427110 NTHL1P78549 312 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 ASAH1Q13510 395 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 MAPK6Q16659 721 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 CYP51A1Q16850 503 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 TPD52L1Q16890 204 aaPredicted RBP1.84□□□□□ -2.11
PTPRC-208ENST00000427110 CCDC57Q2TAC2 916 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 USH1GQ495M9 461 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 GLYR1Q49A26 553 aaPredicted RBP1.84□□□□□ -2.11
PTPRC-208ENST00000427110 FAM74A3Q4VXF1 159 aa1.84□□□□□ -2.11
PTPRC-208ENST00000427110 PAN3Q58A45 887 aaKnown RBP1.84□□□□□ -2.11
PTPRC-208ENST00000427110 TMEM41BQ5BJD5 291 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms