RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 CDKN2CP42773 168 aa12.35□□□□□ -0.43
SNX3-204ENST00000426155 CLNS1AP54105 237 aaKnown RBP12.35□□□□□ -0.43
SNX3-204ENST00000426155 B3GALT5-AS1P59052 145 aa12.35□□□□□ -0.43
SNX3-204ENST00000426155 CD226Q15762 336 aa12.35□□□□□ -0.43
SNX3-204ENST00000426155 DCST2Q5T1A1 773 aa12.35□□□□□ -0.43
SNX3-204ENST00000426155 ACAD11Q709F0 780 aa12.35□□□□□ -0.43
SNX3-204ENST00000426155 C6orf120Q7Z4R8 191 aa12.35□□□□□ -0.43
SNX3-204ENST00000426155 SPATA19Q7Z5L4 167 aa12.35□□□□□ -0.43
SNX3-204ENST00000426155 TNIP2Q8NFZ5 429 aa12.35□□□□□ -0.43
SNX3-204ENST00000426155 LRRC8CQ8TDW0 803 aa12.35□□□□□ -0.43
SNX3-204ENST00000426155 ADAMTS15Q8TE58 950 aa12.35□□□□□ -0.43
SNX3-204ENST00000426155 SH3YL1Q96HL8 342 aaPredicted RBP12.35□□□□□ -0.43
SNX3-204ENST00000426155 SLC35G5Q96KT7 338 aa12.35□□□□□ -0.43
SNX3-204ENST00000426155 SFXN2Q96NB2 322 aa12.35□□□□□ -0.43
SNX3-204ENST00000426155 TRIB1Q96RU8 372 aa12.35□□□□□ -0.43
SNX3-204ENST00000426155 NPAS1Q99742 590 aa12.35□□□□□ -0.43
SNX3-204ENST00000426155 BTBD2Q9BX70 525 aa12.35□□□□□ -0.43
SNX3-204ENST00000426155 USH1CQ9Y6N9 552 aa12.35□□□□□ -0.43
SNX3-204ENST00000426155 TEX15Q9BXT5 2789 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 CENPVL1A0A0U1RR11 272 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 PRSS51A0A1B0GVH4 220 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 HMGB1P1B2RPK0 211 aaPredicted RBP12.34□□□□□ -0.43
SNX3-204ENST00000426155 ALG1L2C9J202 215 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 SLCO1B7G3V0H7 640 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 H0YC42 278 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 OIP5O43482 229 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 ACTL6AO96019 429 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 TBXA2RP21731 343 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 S100A3P33764 101 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 CLK3P49761 638 aaKnown RBP12.34□□□□□ -0.43
SNX3-204ENST00000426155 LHX2P50458 406 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 TPD52P55327 224 aaPredicted RBP12.34□□□□□ -0.43
SNX3-204ENST00000426155 DSCR4P56555 118 aaPredicted RBP12.34□□□□□ -0.43
SNX3-204ENST00000426155 PPP2R2AP63151 447 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.34□□□□□ -0.43
SNX3-204ENST00000426155 RAET1LQ5VY80 246 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 ARSKQ6UWY0 536 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 DNAJC14Q6Y2X3 702 aaPredicted RBP12.34□□□□□ -0.43
SNX3-204ENST00000426155 OR9I1Q8NGQ6 314 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 DYDC1Q8WWB3 177 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 MOAP1Q96BY2 351 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 C1GALT1C1Q96EU7 318 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 C7orf26Q96N11 449 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 TUBA1CQ9BQE3 449 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 EBF4Q9BQW3 602 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 INPP5KQ9BT40 448 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 G6PC3Q9BUM1 346 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 NPDC1Q9NQX5 325 aaPredicted RBP12.34□□□□□ -0.43
SNX3-204ENST00000426155 ZNF446Q9NWS9 450 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 VDAC3Q9Y277 283 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 PCDHGB3Q9Y5G1 929 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 ABCA12Q86UK0 2595 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 CSMD1Q96PZ7 3565 aa12.34□□□□□ -0.43
SNX3-204ENST00000426155 HEATR5AQ86XA9 2040 aa12.33□□□□□ -0.43
SNX3-204ENST00000426155 AHRRA9YTQ3 701 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 H0Y3Z8 333 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 NDUFB5O43674 189 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 GSNP06396 782 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 MATN1P21941 496 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 ZFP36L2P47974 494 aaKnown RBP12.33□□□□□ -0.44
SNX3-204ENST00000426155 CLDN18P56856 261 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 TFF3Q07654 80 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 C17orf67Q0P5P2 114 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 DPY19L1Q2PZI1 675 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 NDUFAF6Q330K2 333 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 PDCD4Q53EL6 469 aaKnown RBP12.33□□□□□ -0.44
SNX3-204ENST00000426155 RIPPLY2Q5TAB7 128 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 ANXA8L1Q5VT79 327 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 TNFAIP8L2Q6P589 184 aaPredicted RBP12.33□□□□□ -0.44
SNX3-204ENST00000426155 EPGNQ6UW88 154 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 PM20D2Q8IYS1 436 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 UBQLNLQ8IYU4 475 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 C9orf106Q8NAJ2 232 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 LILRB4Q8NHJ6 448 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 ACTRT2Q8TDY3 377 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 ASB5Q8WWX0 329 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 RAB8BQ92930 207 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 ARSGQ96EG1 525 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 THOC1Q96FV9 657 aaKnown RBP12.33□□□□□ -0.44
SNX3-204ENST00000426155 CCDC115Q96NT0 180 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 OR51I1Q9H343 314 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 SDHAF3Q9NRP4 125 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 UBQLN4Q9NRR5 601 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 PCDHGB4Q9UN71 923 aa12.33□□□□□ -0.44
SNX3-204ENST00000426155 APCP25054 2843 aa12.32□□□□□ -0.44
SNX3-204ENST00000426155 IGLV3-32A0A0A0MS00 114 aa12.32□□□□□ -0.44
SNX3-204ENST00000426155 OR2M5A3KFT3 312 aa12.32□□□□□ -0.44
SNX3-204ENST00000426155 H3BML4 177 aa12.32□□□□□ -0.44
SNX3-204ENST00000426155 SCDO00767 359 aa12.32□□□□□ -0.44
SNX3-204ENST00000426155 TNFRSF21O75509 655 aa12.32□□□□□ -0.44
SNX3-204ENST00000426155 EPPINO95925 133 aa12.32□□□□□ -0.44
SNX3-204ENST00000426155 PGRP06401 933 aa12.32□□□□□ -0.44
SNX3-204ENST00000426155 NGFRP08138 427 aa12.32□□□□□ -0.44
SNX3-204ENST00000426155 KRT16P08779 473 aa12.32□□□□□ -0.44
SNX3-204ENST00000426155 OR12D1P0DN82 309 aa12.32□□□□□ -0.44
SNX3-204ENST00000426155 IDO1P14902 403 aa12.32□□□□□ -0.44
SNX3-204ENST00000426155 ZNF708P17019 499 aa12.32□□□□□ -0.44
SNX3-204ENST00000426155 ATP6V1C1P21283 382 aa12.32□□□□□ -0.44
SNX3-204ENST00000426155 UQCRC2P22695 453 aa12.32□□□□□ -0.44
SNX3-204ENST00000426155 PTGER4P35408 488 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms