RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 ZER1Q7Z7L7 766 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 CMIPQ8IY22 773 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 LRFN5Q96NI6 719 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 NUDT9Q9BW91 350 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 CTPS2Q9NRF8 586 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 REV1Q9UBZ9 1251 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 TESQ9UGI8 421 aaKnown RBP14.04□□□□□ -0.16
ACTB-204ENST00000425660 CFAP54Q96N23 3096 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 A0A087WXM4 84 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 OR6C76A6NM76 312 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 IDSB3KWA1 339 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 AGRPO00253 132 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 CBFA2T3O75081 653 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 BCAS1O75363 584 aaPredicted RBP14.04□□□□□ -0.16
ACTB-204ENST00000425660 CCDC159P0C7I6 412 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 RFX3P48380 749 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 IL5RAQ01344 420 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 FGFBP1Q14512 234 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 NNATQ16517 81 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 MRPL14Q6P1L8 145 aaKnown RBP14.04□□□□□ -0.16
ACTB-204ENST00000425660 LANCL3Q6ZV70 420 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 PLEKHM3Q6ZWE6 761 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 C9orf40Q8IXQ3 194 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 C17orf47Q8NEP4 570 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 LCORQ96JN0 433 aaPredicted RBP14.04□□□□□ -0.16
ACTB-204ENST00000425660 SPSB2Q99619 263 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 UCK2Q9BZX2 261 aa14.04□□□□□ -0.16
ACTB-204ENST00000425660 NXF5Q9H1B4 397 aaKnown RBP14.04□□□□□ -0.16
ACTB-204ENST00000425660 PPIEQ9UNP9 301 aaKnown RBP14.04□□□□□ -0.16
ACTB-204ENST00000425660 COL27A1Q8IZC6 1860 aaPredicted RBP14.03□□□□□ -0.16
ACTB-204ENST00000425660 DLL1O00548 723 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 TO15178 435 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 GDF9O60383 454 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 IL33O95760 270 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 CCL4P13236 92 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 OSMP13725 252 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 PRG2P13727 222 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 MMP11P24347 488 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 CHMP24386 653 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 HTR2AP28223 471 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 UGT2B15P54855 530 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 TARDBPQ13148 414 aaKnown RBP eCLIP14.03□□□□□ -0.16
ACTB-204ENST00000425660 ILKQ13418 452 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 TOP3AQ13472 1001 aaPredicted RBP14.03□□□□□ -0.16
ACTB-204ENST00000425660 MAD2L1BPQ15013 274 aaPredicted RBP14.03□□□□□ -0.16
ACTB-204ENST00000425660 PTGES3Q15185 160 aaKnown RBP14.03□□□□□ -0.16
ACTB-204ENST00000425660 DECR1Q16698 335 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 RBM44Q6ZP01 1051 aaKnown RBP14.03□□□□□ -0.16
ACTB-204ENST00000425660 GDF7Q7Z4P5 450 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 SUMF1Q8NBK3 374 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 OR4C3Q8NH37 302 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 ACOT11Q8WXI4 607 aaPredicted RBP14.03□□□□□ -0.16
ACTB-204ENST00000425660 SLC41A3Q96GZ6 507 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 CTRCQ99895 268 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 SEMA4CQ9C0C4 833 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 FAM192AQ9GZU8 254 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.03□□□□□ -0.16
ACTB-204ENST00000425660 DNAJB12Q9NXW2 375 aaKnown RBP14.03□□□□□ -0.16
ACTB-204ENST00000425660 COPS7AQ9UBW8 275 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 BLOC1S6Q9UL45 172 aa14.03□□□□□ -0.16
ACTB-204ENST00000425660 C2orf92A0A1B0GVN3 265 aa14.02□□□□□ -0.16
ACTB-204ENST00000425660 ZAR1LA6NP61 321 aa14.02□□□□□ -0.16
ACTB-204ENST00000425660 B4E171 279 aa14.02□□□□□ -0.16
ACTB-204ENST00000425660 CNOT3O75175 753 aaKnown RBP14.02□□□□□ -0.16
ACTB-204ENST00000425660 LCN1P31025 176 aa14.02□□□□□ -0.16
ACTB-204ENST00000425660 TSPAN7P41732 249 aa14.02□□□□□ -0.16
ACTB-204ENST00000425660 CRISP1P54107 249 aa14.02□□□□□ -0.16
ACTB-204ENST00000425660 CDH15P55291 814 aa14.02□□□□□ -0.16
ACTB-204ENST00000425660 GABARAPL2P60520 117 aa14.02□□□□□ -0.16
ACTB-204ENST00000425660 LSM11P83369 360 aaKnown RBP eCLIP14.02□□□□□ -0.169e-19■■■■■ 27
ACTB-204ENST00000425660 ALDH6A1Q02252 535 aaKnown RBP14.02□□□□□ -0.16
ACTB-204ENST00000425660 FOXD4Q12950 439 aaPredicted RBP14.02□□□□□ -0.16
ACTB-204ENST00000425660 SF3A2Q15428 464 aaKnown RBP14.02□□□□□ -0.16
ACTB-204ENST00000425660 ZNF517Q6ZMY9 492 aaPredicted RBP14.02□□□□□ -0.16
ACTB-204ENST00000425660 Q6ZPB1 254 aaPredicted RBP14.02□□□□□ -0.16
ACTB-204ENST00000425660 SHISA6Q6ZSJ9 500 aa14.02□□□□□ -0.16
ACTB-204ENST00000425660 ANKRD37Q7Z713 158 aa14.02□□□□□ -0.16
ACTB-204ENST00000425660 NAXDQ8IW45 347 aa14.02□□□□□ -0.16
ACTB-204ENST00000425660 ENTHD1Q8IYW4 607 aa14.02□□□□□ -0.16
ACTB-204ENST00000425660 ZNF441Q8N8Z8 693 aa14.02□□□□□ -0.16
ACTB-204ENST00000425660 CNIH3Q8TBE1 160 aa14.02□□□□□ -0.16
ACTB-204ENST00000425660 HOXD1Q9GZZ0 328 aa14.02□□□□□ -0.16
ACTB-204ENST00000425660 WDR54Q9H977 334 aa14.02□□□□□ -0.16
ACTB-204ENST00000425660 NTNG1Q9Y2I2 539 aa14.02□□□□□ -0.16
ACTB-204ENST00000425660 TRAPPC13A5PLN9 417 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 SLC1A7O00341 560 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 ALOX12BO75342 701 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 TP53P04637 393 aaPredicted RBP14.01□□□□□ -0.17
ACTB-204ENST00000425660 HEXBP07686 556 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 GKN3PP0CG01 181 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 AGXTP21549 392 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 IFNGR2P38484 337 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 ADH7P40394 386 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 FOXL2P58012 376 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 PSPHP78330 225 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 TEKQ02763 1124 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 KLHL26Q53HC5 615 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 FOXB2Q5VYV0 432 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 LCN10Q6JVE6 187 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 ZNF613Q6PF04 617 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms