RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 ZAR1Q86SH2 424 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 KRTCAP2Q8N6L1 136 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 FAM110BQ8TC76 370 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 ADAMTS15Q8TE58 950 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 FAM120BQ96EK7 910 aaKnown RBP8.38□□□□□ -1.07
NUP50-206ENST00000422489 GIMAP5Q96F15 307 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 PGM2Q96G03 612 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 ZNF764Q96H86 408 aaPredicted RBP8.38□□□□□ -1.07
NUP50-206ENST00000422489 ZNF845Q96IR2 970 aaPredicted RBP8.38□□□□□ -1.07
NUP50-206ENST00000422489 PKNOX2Q96KN3 472 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 MS4A4EQ96PG1 132 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 PAIP2Q9BPZ3 127 aaKnown RBP8.38□□□□□ -1.07
NUP50-206ENST00000422489 ZNF395Q9H8N7 513 aaPredicted RBP8.38□□□□□ -1.07
NUP50-206ENST00000422489 UBQLN4Q9NRR5 601 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 ATAD3AQ9NVI7 634 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 GIN1Q9NXP7 522 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 GALNT8Q9NY28 637 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 CLCF1Q9UBD9 225 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 STOML1Q9UBI4 398 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 NDRG3Q9UGV2 375 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 ST6GALNAC2Q9UJ37 374 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 PACSIN3Q9UKS6 424 aa8.38□□□□□ -1.07
NUP50-206ENST00000422489 FAF1Q9UNN5 650 aaPredicted RBP8.38□□□□□ -1.07
NUP50-206ENST00000422489 EML6Q6ZMW3 1958 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 SH3D21A4FU49 640 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 ALG1L2C9J202 215 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 GTPBP1O00178 669 aaKnown RBP8.37□□□□□ -1.07
NUP50-206ENST00000422489 HCRTR2O43614 444 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 ITM2AO43736 263 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 TYROBPO43914 113 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 TNFSF13O75888 250 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 C6orf47O95873 294 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 G6PDP11413 515 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 SOAT1P35610 550 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 MAP3K8P41279 467 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 FRKP42685 505 aaPredicted RBP8.37□□□□□ -1.07
NUP50-206ENST00000422489 EIF1AXP47813 144 aaKnown RBP8.37□□□□□ -1.07
NUP50-206ENST00000422489 ZNF41P51814 821 aaPredicted RBP8.37□□□□□ -1.07
NUP50-206ENST00000422489 SORDQ00796 357 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 FAM27E3Q08E93 113 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 MLC1Q15049 377 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 PON3Q15166 354 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 CHI3L2Q15782 390 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 XKR7Q5GH72 579 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 VWA1Q6PCB0 445 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 BTLAQ7Z6A9 289 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 WDR75Q8IWA0 830 aaKnown RBP8.37□□□□□ -1.07
NUP50-206ENST00000422489 NATD1Q8N6N6 113 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 FNDC9Q8TBE3 224 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 PHOSPHO1Q8TCT1 267 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 CDS1Q92903 461 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 COQ8BQ96D53 544 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 STARD4Q96DR4 205 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 DUSP26Q9BV47 211 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 TMEM109Q9BVC6 243 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 BTBD2Q9BX70 525 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 ACTRT3Q9BYD9 372 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 OPN3Q9H1Y3 402 aaPredicted RBP8.37□□□□□ -1.07
NUP50-206ENST00000422489 PIGUQ9H490 435 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 CXorf36Q9H7Y0 433 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 HHATLQ9HCP6 504 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 SIRT3Q9NTG7 399 aaPredicted RBP8.37□□□□□ -1.07
NUP50-206ENST00000422489 NTMQ9P121 344 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 CLEC4AQ9UMR7 237 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 AP4B1Q9Y6B7 739 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 KCNE3Q9Y6H6 103 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 ZNF407Q9C0G0 2248 aa8.37□□□□□ -1.07
NUP50-206ENST00000422489 PCNX1Q96RV3 2341 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 A0A087WZY1 265 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 IGLV3-32A0A0A0MS00 114 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 NPIPA5A0A0B4J1W7 369 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 FAM221AA4D161 298 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 NPIPA7E9PJI5 369 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 MSTNO14793 375 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 CXCL13O43927 109 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 SYNGR4O95473 234 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 CPSF4O95639 269 aaKnown RBP8.36□□□□□ -1.07
NUP50-206ENST00000422489 NUDT14O95848 222 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 PLGP00747 810 aaPredicted RBP8.36□□□□□ -1.07
NUP50-206ENST00000422489 CRHP06850 196 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 NPIPA8P0DM63 369 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 PRPS1L1P21108 318 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 ETV4P43268 484 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 KIR2DL2P43627 348 aaPredicted RBP8.36□□□□□ -1.07
NUP50-206ENST00000422489 ABCE1P61221 599 aaKnown RBP8.36□□□□□ -1.07
NUP50-206ENST00000422489 EMX2Q04743 252 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 ZNF844Q08AG5 666 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 MAD2L1Q13257 205 aaPredicted RBP8.36□□□□□ -1.07
NUP50-206ENST00000422489 KEAP1Q14145 624 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 PDCD2Q16342 344 aaPredicted RBP8.36□□□□□ -1.07
NUP50-206ENST00000422489 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.36□□□□□ -1.07
NUP50-206ENST00000422489 EXOC3L2Q2M3D2 409 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 CEP85LQ5SZL2 805 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 CDC73Q6P1J9 531 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 SPNS3Q6ZMD2 512 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 ZNF614Q8N883 585 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 ZNF781Q8N8C0 355 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 ZNF610Q8N9Z0 462 aa8.36□□□□□ -1.07
NUP50-206ENST00000422489 ATP6V1C2Q8NEY4 427 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms